[←][→] ath   AT3G22270 Gene
functional annotation
Function   Topoisomerase II-associated protein PAT1  
GO BP
GO:0000290 [list] [network] deadenylation-dependent decapping of nuclear-transcribed mRNA  (7 genes)  IBA  
GO:0033962 [list] [network] cytoplasmic mRNA processing body assembly  (11 genes)  IBA  
GO:0019827 [list] [network] stem cell population maintenance  (54 genes)  IMP  
GO CC
GO:0000932 [list] [network] P-body  (56 genes)  IBA  
GO:0005783 [list] [network] endoplasmic reticulum  (877 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA  
GO MF
GO:0003723 [list] [network] RNA binding  (1790 genes)  IBA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03018 [list] [network] RNA degradation (113 genes)
Protein NP_188866.1 
BLAST NP_188866.1 
Orthologous [Ortholog page] AT4G14990 (ath)  AT1G79090 (ath)  LOC4325594 (osa)  LOC4329480 (osa)  LOC7454988 (ppo)  LOC7480371 (ppo)  LOC7495641 (ppo)  LOC25487016 (mtr)  LOC25487017 (mtr)  LOC100255521 (vvi)  LOC100267869 (vvi)  LOC100272651 (zma)  LOC100779096 (gma)  LOC100787112 (gma)  LOC100787648 (gma)  LOC100805313 (gma)  LOC100812450 (gma)  LOC101253667 (sly)  LOC101257075 (sly)  LOC101260608 (sly)  LOC103630586 (zma)  LOC103830497 (bra)  LOC103832387 (bra)  LOC103834665 (bra)  LOC103869095 (bra)  LOC103871463 (bra)  LOC103872452 (bra) 
Subcellular
localization
wolf
nucl 5,  vacu 1,  chlo 1,  cyto 1,  mito 1,  E.R. 1,  golg 1,  chlo_mito 1,  cyto_E.R. 1  (predict for NP_188866.1)
Subcellular
localization
TargetP
other 7  (predict for NP_188866.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
Genes directly connected with AT3G22270 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.6 AT3G60850 hypothetical protein [detail] 825256
7.4 ECT7 evolutionarily conserved C-terminal region 7 [detail] 841229
7.4 AT3G52250 Duplicated homeodomain-like superfamily protein [detail] 824390
6.4 AT2G28540 RNA binding (RRM/RBD/RNP motifs) family protein [detail] 817402
6.2 FRS7 FAR1-related sequence 7 [detail] 819799
6.1 ZTL Galactose oxidase/kelch repeat superfamily protein [detail] 835842
5.7 RHC1A RING-H2 finger C1A [detail] 818680
5.6 AT2G39950 flocculation protein [detail] 818582
5.4 UBP1B oligouridylate binding protein 1B [detail] 838309
Coexpressed
gene list		 [Coexpressed gene list for AT3G22270]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 821797      
Refseq ID (protein) NP_188866.1 


The preparation time of this page was 0.2 [sec].