[←][→] ath   AT4G14990 Gene
functional annotation
Function   Topoisomerase II-associated protein PAT1  
GO BP
GO:0000290 [list] [network] deadenylation-dependent decapping of nuclear-transcribed mRNA  (7 genes)  IBA  
GO:0033962 [list] [network] cytoplasmic mRNA processing body assembly  (11 genes)  IBA  
GO:0006397 [list] [network] mRNA processing  (376 genes)  IEA  
GO CC
GO:0000932 [list] [network] P-body  (56 genes)  IBA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1026 genes)  IDA  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IBA  
KEGG ath03018 [list] [network] RNA degradation (113 genes)
Protein NP_001328555.1  NP_567452.2 
BLAST NP_001328555.1  NP_567452.2 
Orthologous [Ortholog page] AT3G22270 (ath)  AT1G79090 (ath)  LOC4325594 (osa)  LOC4329480 (osa)  LOC7454988 (ppo)  LOC7480371 (ppo)  LOC7495641 (ppo)  LOC25487016 (mtr)  LOC25487017 (mtr)  LOC100255521 (vvi)  LOC100267869 (vvi)  LOC100272651 (zma)  LOC100779096 (gma)  LOC100787112 (gma)  LOC100787648 (gma)  LOC100805313 (gma)  LOC100812450 (gma)  LOC101253667 (sly)  LOC101257075 (sly)  LOC101260608 (sly)  LOC103630586 (zma)  LOC103830497 (bra)  LOC103832387 (bra)  LOC103834665 (bra)  LOC103869095 (bra)  LOC103871463 (bra)  LOC103872452 (bra) 
Subcellular
localization
wolf
nucl 5,  cyto 1,  vacu 1,  chlo 1,  mito 1,  golg 1,  chlo_mito 1,  E.R._vacu 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001328555.1)
nucl 5,  cyto 1,  vacu 1,  chlo 1,  E.R. 1,  golg 1,  cyto_pero 1,  cyto_plas 1  (predict for NP_567452.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001328555.1)
other 8  (predict for NP_567452.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
Genes directly connected with AT4G14990 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.7 AT1G77680 Ribonuclease II/R family protein [detail] 844104
4.9 AT2G18750 Calmodulin-binding protein [detail] 816390
4.8 AT4G28300 formin-like protein (DUF1421) [detail] 828945
Coexpressed
gene list		 [Coexpressed gene list for AT4G14990]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245282_at
245282_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245282_at
245282_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245282_at
245282_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827158      
Refseq ID (protein) NP_001328555.1 
NP_567452.2 


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