[←][→] vvi   VIT_00020437001 Gene
functional annotation
Function   protein PAT1 homolog 1  
GO BP
GO CC
GO MF
KEGG vvi03018 [list] [network] RNA degradation (104 genes)
Protein XP_010645006.1  XP_010645007.1  XP_010645008.1 
BLAST XP_010645006.1  XP_010645007.1  XP_010645008.1 
Orthologous [Ortholog page] AT3G22270 (ath)  AT4G14990 (ath)  AT1G79090 (ath)  LOC4325594 (osa)  LOC4329480 (osa)  LOC7454988 (ppo)  LOC7480371 (ppo)  LOC7495641 (ppo)  LOC25487016 (mtr)  LOC25487017 (mtr)  LOC100255521 (vvi)  LOC100272651 (zma)  LOC100779096 (gma)  LOC100787112 (gma)  LOC100787648 (gma)  LOC100805313 (gma)  LOC100812450 (gma)  LOC101253667 (sly)  LOC101257075 (sly)  LOC101260608 (sly)  LOC103630586 (zma)  LOC103830497 (bra)  LOC103832387 (bra)  LOC103834665 (bra)  LOC103869095 (bra)  LOC103871463 (bra)  LOC103872452 (bra) 
Subcellular
localization
wolf
nucl 4,  chlo 3,  cysk_nucl 3,  vacu 1  (predict for XP_010645006.1)
nucl 4,  chlo 3,  cysk_nucl 2,  mito 2  (predict for XP_010645007.1)
nucl 4,  chlo 4,  cysk_nucl 2,  mito 1  (predict for XP_010645008.1)
Subcellular
localization
TargetP
other 9  (predict for XP_010645006.1)
mito 5,  other 5  (predict for XP_010645007.1)
other 5,  mito 5  (predict for XP_010645008.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 4
vvi03018 RNA degradation 3
vvi04141 Protein processing in endoplasmic reticulum 2
Genes directly connected with LOC100267869 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.6 LOC100255521 protein PAT1 homolog 1 [detail] 100255521
8.1 LOC100854676 actin cytoskeleton-regulatory complex protein PAN1 [detail] 100854676
7.4 LOC100248456 uncharacterized LOC100248456 [detail] 100248456
6.9 LOC100258598 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform-like [detail] 100258598
5.8 LOC100260740 DIS3-like exonuclease 2 [detail] 100260740
4.7 LOC100252271 scarecrow-like protein 22 [detail] 100252271
Coexpressed
gene list		 [Coexpressed gene list for LOC100267869]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 100267869      
Refseq ID (protein) XP_010645006.1 
XP_010645007.1 
XP_010645008.1 


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