ATTED-II : GeneID search result

[←][→] ath AT3G29410 Gene

functional annotation

Function

Terpenoid cyclases/Protein prenyltransferases superfamily protein

GO BP

GO:0051762 [list] [network] sesquiterpene biosynthetic process	(25 genes)	IBA
GO:0016114 [list] [network] terpenoid biosynthetic process	(131 genes)	IDA IEA

GO CC

GO:0009507 [list] [network] chloroplast	(5095 genes)	ISM
GO:0005737 [list] [network] cytoplasm	(14855 genes)	IEA

GO MF

GO:0010333 [list] [network] terpene synthase activity	(32 genes)	IDA
GO:0009975 [list] [network] cyclase activity	(42 genes)	IBA
GO:0000287 [list] [network] magnesium ion binding	(115 genes)	IEA

KEGG

Protein

NP_001325487.1 NP_189587.1

BLAST

NP_001325487.1 NP_189587.1

Orthologous

[Ortholog page] LOC542156 (zma) LOC542688 (zma) LOC542689 (zma) LOC542754 (zma) SSTLE1 (sly) LOC732751 (zma) LOC732795 (zma) LOC732834 (zma) AT2G23230 (ath) AT3G14490 (ath) AT3G14520 (ath) AT3G14540 (ath) AT3G29110 (ath) AT3G29190 (ath) AT3G32030 (ath) TPS12 (ath) TPS13 (ath) TS1 (ath) AT4G20200 (ath) AT4G20210 (ath) AT4G20230 (ath) TPS21 (ath) AT5G48110 (ath) AT1G31950 (ath) AT1G33750 (ath) AT1G48800 (ath) AT1G48820 (ath) AT1G66020 (ath) AT1G70080 (ath) LOC4326845 (osa) LOC4332831 (osa) LOC4332889 (osa) LOC4332893 (osa) LOC4332895 (osa) LOC4333167 (osa) LOC4335518 (osa) LOC4335522 (osa) LOC4335526 (osa) LOC4335529 (osa) LOC4344635 (osa) LOC4344755 (osa) LOC7454979 (ppo) LOC7457170 (ppo) LOC7457783 (ppo) LOC9267045 (osa) LOC9267316 (osa) LOC9270657 (osa) LOC9272299 (osa) LOC11405529 (mtr) LOC11407907 (mtr) LOC11411115 (mtr) LOC11416693 (mtr) LOC11421083 (mtr) LOC11426332 (mtr) LOC11432484 (mtr) LOC25490897 (mtr) LOC25491517 (mtr) LOC25492138 (mtr) LOC25492939 (mtr) LOC25496253 (mtr) LOC25500131 (mtr) LOC100125649 (zma) LOC100232954 (vvi) VALCS (vvi) LOC100241381 (vvi) LOC100241480 (vvi) LOC100241877 (vvi) LOC100243606 (vvi) LOC100246608 (vvi) LOC100249970 (vvi) LOC100252140 (vvi) LOC100255553 (vvi) LOC100256880 (vvi) LOC100257265 (vvi) LOC100258596 (vvi) LOC100260112 (vvi) GERA (vvi) LOC100260629 (vvi) LOC100260714 (vvi) LOC100261959 (vvi) LOC100261963 (vvi) LOC100263746 (vvi) LOC100264159 (vvi) LOC100265509 (vvi) LOC100267137 (vvi) LOC100267145 (vvi) LOC100267551 (vvi) LOC100273678 (zma) LOC100281754 (zma) TPS19 (gma) TPS16 (gma) TPS10 (gma) TPS11 (gma) LOC100802427 (gma) TPS13 (gma) TPS31 (sly) TPS17 (sly) TPS16 (sly) LOC101245838 (sly) TPS14 (sly) TPS36 (sly) LOC101257190 (sly) LOC101258081 (sly) TPS28 (sly) TPS32 (sly) TPS33 (sly) TPS35 (sly) LOC103629258 (zma) LOC103641097 (zma) LOC103641099 (zma) LOC103641105 (zma) LOC103641187 (zma) LOC103641226 (zma) LOC103646867 (zma) LOC103834122 (bra) LOC103834164 (bra) LOC103838683 (bra) LOC103839120 (bra) LOC103841971 (bra) LOC103841981 (bra) LOC103842000 (bra) LOC103844604 (bra) LOC103845195 (bra) LOC103848456 (bra) LOC103849526 (bra) LOC103849591 (bra) LOC103859578 (bra) LOC103859580 (bra) LOC103860598 (bra) LOC103861083 (bra) LOC103861084 (bra) LOC103862704 (bra) LOC103863851 (bra) LOC103864213 (bra) LOC103874257 (bra) LOC103874801 (bra) TPS12 (sly) LOC104648119 (sly) LOC107275762 (osa) LOC107276422 (osa) LOC107276496 (osa) LOC107277636 (osa) LOC107277734 (osa) LOC107278021 (osa) LOC107278125 (osa) LOC107278693 (osa) LOC107280712 (osa) LOC107280931 (osa) LOC107280950 (osa) LOC108870167 (bra) LOC109941320 (zma) LOC109943031 (zma) LOC109943306 (zma)

Subcellular
localization
wolf

cyto 6, cyto_E.R. 4, nucl 1, vacu 1, cysk 1, golg 1, nucl_plas 1	(predict for NP_001325487.1)
chlo 9, mito 1, E.R. 1	(predict for NP_189587.1)

Subcellular
localization
TargetP

scret 7, other 5	(predict for NP_001325487.1)
chlo 5	(predict for NP_189587.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00940	Phenylpropanoid biosynthesis	4

Genes directly connected with AT3G29410 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
4.6	TIP4;1	tonoplast intrinsic protein 4;1	[detail]	817123
4.4	PDF2.5	Scorpion toxin-like knottin superfamily protein	[detail]	836486
3.8	AT4G30170	Peroxidase family protein	[detail]	829140

Coexpressed
gene list

[Coexpressed gene list for AT3G29410]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

256736_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

256736_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

256736_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	822602
Refseq ID (protein)	NP_001325487.1
Refseq ID (protein)	NP_189587.1

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