cis; AAGATAT

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
  GATA  GATABOX [ref] [ref] [ref] [ref] [ref]

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of AAGATAT

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of AAGATAT.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.65At1g67970heat shock factor protein, putative (HSF5) / heat shock transcription factor, putative (HSTF5) ((AT-HSFA8)) HSF
0.61At2g18670zinc finger (C3HC4-type RING finger) family protein C3H
0.58At4g17230scarecrow-like transcription factor 13 (SCL13) GRAS
0.57At5g66070zinc finger (C3HC4-type RING finger) family protein C3H
0.56At4g18880heat shock transcription factor 21 (HSF21) ((AT-HSFA4A)) HSF
0.55At1g08900sugar transporter-related C2H2
0.52At1g22070bZIP family transcription factor (TGA3) ((TGA3)) bZIP
0.52At2g30250WRKY family transcription factor ((WRKY25)) WRKY
0.52At1g49720ABA-responsive element-binding protein / abscisic acid responsive elements-binding factor (ABRE) ((ABF1)) bZIP
0.51At3g50260AP2 domain-containing transcription factor, putative AP2-EREBP
0.51At2g47890zinc finger (B-box type) family protein C2C2-CO-like
0.51At5g63790no apical meristem (NAM) family protein NAC
0.51At1g19310zinc finger (C3HC4-type RING finger) family protein C3H
0.50At1g78600zinc finger (B-box type) family protein C2C2-CO-like
-0.50At3g06740zinc finger (GATA type) family protein C2C2-Gata

link to other 304 cis elements in ATTED

similar seq.
←AAGATAT→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; ATATCTT
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
AAGATAT1.000.0750
GATATTT0.890.1049
AGATATT0.870.1128
AATATCT0.830.1480
AAATATC0.800.1477
ATATCTT0.710.0779
ATATCTA0.690.0889
AAAATAT0.620.07118