Help

Tutorial Movies

• Tutorial movies (English and Japanese)

Documents

Examples

• Example 1; Functional estimation of a gene. (At5g52360)
• Example 2; Making gene lists for a particular biological function. (wounding response)
• Example 3; Regulatory estimation of a gene. (At5g62490)

Presentation documents (PDF, English)

• 2010-12-23: Evaluation of coex data (memo)
• 2010-03-10: Effectiveness of MR (AYRCOB, Tainan)

Terms

• Terms in ATTED-II

FAQ

• FAQ
• API
• RDF
• Network analyses in Cytoscape

License

• License

About us

• About us
  

Calculation detail

Coexpression data

• Source of GeneChip data (downloaded from TAIR)
  • Description of the 58 experiments
  • Description of the 1388 array slides
  • Description of Ath.c4-1 subseries
• Calculation
• Rank and Mutual Rank

Coexpressed gene network

• Gene selections for coexpressed gene networks
• Coexpressed gene network

Coexpressed gene search

• Coexpressed gene search

Advanced genene analysis

• Prediction of cis elements
• Prediction of trans-factor binding a cis element

Access log

• Access log