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• Types of pages (version 5.2)

Types of pages	# pages	Example
Locus	33332	random
Coexpressed gene list	20703	random
Gene network for a GO	818	random
Gene network for an organelle	6	list
Gene list for a GO	3309	random
Gene list for KEGG, AraCyc, KaPPA	542	random
cis element	304	list

• Tutorials
1. Functional estimation of a gene. (At5g52360)
2. Making gene lists for a particular biological function. (wounding response)
3. Regulatory estimation of a gene. (At5g62490)
• Presentation documents (PDF, English)
• 2010-03-10: Effectiveness of MR (AYRCOB, Tainan)
• Movie (Japanese)
• Togo TV; General introduction for ATTED-II version 5.2 prepared by Togo TV staff.
• Methods
• Coexpression data
• Source of GeneChip data (downloaded from TAIR)
• Description of the 58 experiments
• Description of the 1388 array slides
• Calculation of PCC
• Calculation of MR from PCC
• Coexpressed gene network
• Coexpressed gene network
• Coexpressed gene search
• Coexpressed gene search
• Prediction of cis elements (CEG method)
• Prediction of cis elements
• Prediction of trans-factor binding a cis element
• Terms
• Terms in ATTED-II