cis; GGAACGC


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of GGAACGC

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GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of GGAACGC.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
-0.57At3g52800zinc finger (AN1-like) family protein C2H2
0.54At1g14410DNA-binding protein-related WHIRLY
-0.54At3g62420bZIP transcription factor family protein bZIP
-0.54At1g08320bZIP family transcription factor bZIP
-0.53At3g19580zinc finger (C2H2 type) protein 2 (AZF2) ((AZF2)) C2H2
-0.52At3g02340zinc finger (C3HC4-type RING finger) family protein C3H
-0.50At5g67300myb family transcription factor MYB
-0.50At1g28370ERF domain protein 11 (ERF11) AP2-EREBP
-0.50At4g33940zinc finger (C3HC4-type RING finger) family protein C3H
0.49At1g71260expressed protein WHIRLY
-0.49At5g45710heat shock transcription factor family protein ((AT-HSFA4C)) HSF
-0.49At3g20310ethylene-responsive element-binding family protein ((ATERF7)) AP2-EREBP
-0.48At4g27410no apical meristem (NAM) family protein (RD26) ((RD26)) NAC
-0.48At1g50600scarecrow-like transcription factor 5 (SCL5) GRAS
-0.48At4g17230scarecrow-like transcription factor 13 (SCL13) GRAS

link to other 304 cis elements in ATTED

similar seq.
GGAACGC
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; GCGTTCC
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
GGAACGC1.000.06101
TTCTGGA0.690.0782
CTAGAAG0.650.0641
CTTCTAG0.650.1090
CTAGAAC0.640.1138
TAGAACC0.640.0783
GCGAAGG0.610.0979