cis; TATGGGC


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of TATGGGC

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GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of TATGGGC.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.68At4g3093050S ribosomal protein L21, mitochondrial (RPL21M) ((WRKY32)) WRKY
0.63At1g71260expressed protein WHIRLY
0.62At3g57150dyskerin, putative / nucleolar protein NAP57, putative ((NAP57)) NAC
0.57At5g16070chaperonin, putative TCP
0.55At1g14410DNA-binding protein-related WHIRLY
0.55At3g52910expressed protein GRF
0.54At1g27050homeobox-leucine zipper family protein Homeobox
-0.54At3g19580zinc finger (C2H2 type) protein 2 (AZF2) ((AZF2)) C2H2
0.54At5g02470DP-2 transcription factor, putative (DPA) ((DPA)) E2F-DP
-0.53At4g27410no apical meristem (NAM) family protein (RD26) ((RD26)) NAC
0.53At1g72050zinc finger (C2H2 type) family protein C2H2
-0.52At5g04340zinc finger (C2H2 type) family protein ((C2H2)) C2H2
0.51At3g16870zinc finger (GATA type) family protein C2C2-Gata
-0.51At3g02340zinc finger (C3HC4-type RING finger) family protein C3H
0.51At5g05610PHD finger family protein Alfin-like

link to other 304 cis elements in ATTED

similar seq.
TATGGGC
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; GCCCATA
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
TATGGGC1.000.0792
TGGGCCT0.970.1096
ATGGGCC0.970.0987
TTGGGCC0.960.0998
GGGCCTA0.960.0794
GGGCCTT0.960.0796
AATGGGC0.960.0988
ATGGGCT0.960.08100
TGGGCTT0.950.0992
GGCCCAA0.950.0962