cis; TCCCTAT

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of TCCCTAT

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of TCCCTAT.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.43At2g22900galactosyl transferase GMA12/MNN10 family protein CAMTA
0.41At2g23340AP2 domain-containing transcription factor, putative AP2-EREBP
-0.40At2g18300basic helix-loop-helix (bHLH) family protein BHLH

link to other 304 cis elements in ATTED

similar seq.
←TCCCTAT→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; ATAGGGA
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
TCCCTAT1.000.0643
AACGTGT0.700.0790
ACACGTT0.680.0633
AACACGT0.660.0794
CGTGTCC0.640.0882
TTACACG0.630.06113
CACGTGT0.630.1292
TACACGT0.630.09112
ACGTGTA0.630.0682
ACGTGTC0.630.1184