cis; TCTCTCT

Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
  TCTCTCTCT CTRMCAMV35S [ref]
TCTCTCTCT   CTRMCAMV35S [ref]

CEG profile for position preference

CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of TCTCTCT

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GO IDterm-Log(p)number of
{A; genes in a GO}		numver of
{B; genes with this heptamer}		{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of TCTCTCT.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.44At5g08130basic helix-loop-helix (bHLH) family protein BHLH
0.44At2g22900galactosyl transferase GMA12/MNN10 family protein CAMTA
0.44At1g01260basic helix-loop-helix (bHLH) family protein BHLH
0.43At1g08000zinc finger (GATA type) family protein C2C2-Gata
0.41At3g61830transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related ARF
0.41At5g60200Dof-type zinc finger domain-containing protein C2C2-Dof

link to other 304 cis elements in ATTED

similar seq.
←TCTCTCT→
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; AGAGAGA
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
TCTCTCT1.000.0746
CTCTCTC0.920.0674
CTCTCTT0.790.0717
CCTCTCT0.620.0657