cis; CCTCTCT


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of CCTCTCT

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GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of CCTCTCT.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.62At1g21910AP2 domain-containing transcription factor family protein AP2-EREBP
0.59At4g36730G-box binding factor 1 (GBF1) ((GBF1)) bZIP
0.59At3g50060myb family transcription factor MYB
0.58At4g01250WRKY family transcription factor ((WRKY22)) WRKY
0.57At3g20310ethylene-responsive element-binding family protein ((ATERF7)) AP2-EREBP
0.54At5g49520WRKY family transcription factor ((WRKY48)) WRKY
0.53At3g62420bZIP transcription factor family protein bZIP
0.53At5g67300myb family transcription factor MYB
0.53At3g54810zinc finger (GATA type) family protein C2C2-Gata
0.53At3g52800zinc finger (AN1-like) family protein C2H2
0.52At1g50600scarecrow-like transcription factor 5 (SCL5) GRAS
0.51At5g24590turnip crinkle virus-interacting protein / TCV-interacting protein (TIP) ((TIP)) NAC
0.50At4g33940zinc finger (C3HC4-type RING finger) family protein C3H
0.50At4g31800WRKY family transcription factor ((WRKY18)) WRKY
0.49At1g69570Dof-type zinc finger domain-containing protein C2C2-Dof

link to other 304 cis elements in ATTED

similar seq.
CCTCTCT
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; AGAGAGG
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
CCTCTCT1.000.0657
TCTTTCC0.830.0638
ACGCGCT0.830.09111
ACCGCGT0.810.1098
CTCTCTT0.810.0717
AGCTGTT0.800.07127
CTTTCCT0.800.0647
AACGCGT0.800.10127
ACGCGTT0.790.1096
ACGCGGT0.790.09141