Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G52850   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-r.7   AT5G52850   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.9   AT5G52850   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-e.2   AT5G52850   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.bio   AT5G52850   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.hor   AT5G52850   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.lig   AT5G52850   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.str   AT5G52850   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.tis   AT5G52850   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100791770   pentatricopeptide repeat-containing protein At5g52850, chloroplastic 
 vvi-u.5   100254325   pentatricopeptide repeat-containing protein At5g52850, chloroplastic 
 mtr-u.5   11414844   pentatricopeptide repeat-containing protein At5g52850, chloroplastic 
 osa-u.5   4334879   pentatricopeptide repeat-containing protein At5g52850, chloroplastic 
 zma-u.5   103644348   pentatricopeptide repeat-containing protein At5g52850, chloroplastic 

close


Top 50 coexpressed genes to AT5G52850 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT5G52850 (ath-u.5 coexpression data)

CoexMap"835362"


athAT5G52850 | Entrez gene ID : 835362      
Species ath gma vvi mtr osa zma sot hvu tae cit sbi ppo sly ghi cre bna nta bdi bra
Paralog 9 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO MF
Protein NP_200097.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for NP_200097.1)
Subcellular
localization
TargetP
chlo 5,  scret 4  (predict for NP_200097.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G52850

.
ath-r.7
for
AT5G52850

.
ath-m.9
for
AT5G52850

.
ath-e.2
for
AT5G52850

.
ath-m.4.bio
for
AT5G52850

.
ath-m.4.hor
for
AT5G52850

.
ath-m.4.lig
for
AT5G52850

.
ath-m.4.str
for
AT5G52850

.
ath-m.4.tis
for
AT5G52850

.
gma-u.5
for
100791770

.
vvi-u.5
for
100254325

.
mtr-u.5
for
11414844

.
osa-u.5
for
4334879

.
zma-u.5
for
103644348

.


Ortholog ID: 13200
Species ath gma osa zma bra vvi mtr tae tae hvu ghi bna bdi
Symbol AT5G52850 LOC100791770 LOC4334879 LOC103644348 LOC103844759 LOC100254325 LOC11414844 LOC123114518 LOC123124014 LOC123397470 LOC107944431 LOC106442854 LOC100837316
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At5g52850, chloroplastic pentatricopeptide repeat-containing protein At5g52850, chloroplastic pentatricopeptide repeat-containing protein At5g52850, chloroplastic pentatricopeptide repeat-containing protein At5g52850, chloroplastic pentatricopeptide repeat-containing protein At5g52850, chloroplastic pentatricopeptide repeat-containing protein At5g52850, chloroplastic pentatricopeptide repeat-containing protein At5g52850, chloroplastic pentatricopeptide repeat-containing protein At5g52850, chloroplastic pentatricopeptide repeat-containing protein At5g52850, chloroplastic-like pentatricopeptide repeat-containing protein At5g52850, chloroplastic pentatricopeptide repeat-containing protein At5g52850, chloroplastic-like pentatricopeptide repeat-containing protein At5g52850, chloroplastic
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03430 Mismatch repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835362 100791770 4334879 103644348 103844759 100254325 11414844 123114518 123124014 123397470 107944431 106442854 100837316
The preparation time of this page was 0.2 [sec].