Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5  11414844  pentatricopeptide repeat-containing protein At5g52850, chloroplastic 
 mtr-r.5  11414844  pentatricopeptide repeat-containing protein At5g52850, chloroplastic 
 mtr-m.5  11414844  pentatricopeptide repeat-containing protein At5g52850, chloroplastic 
 gma-u.5  100791770  pentatricopeptide repeat-containing protein At5g52850, chloroplastic 
 ath-u.5  AT5G52850  Pentatricopeptide repeat (PPR) superfamily protein 
 vvi-u.5  100254325  pentatricopeptide repeat-containing protein At5g52850, chloroplastic 
 osa-u.5  4334879  pentatricopeptide repeat-containing protein At5g52850, chloroplastic 
 zma-u.5  103644348  pentatricopeptide repeat-containing protein At5g52850, chloroplastic 

close


Top 50 coexpressed genes to 11414844 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 11414844 (mtr-u.5 coexpression data)

CoexMap"11414844"


mtrLOC11414844 | Entrez gene ID : 11414844
Species mtr gma ath vvi osa zma sly sbi nta bra cre hvu cit bdi ppo sot tae bna ghi
Paralog 3 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (432 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (919 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1400 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5045 genes)  IEA  
Protein XP_024642260.1 [sequence] [blastp]
XP_039685849.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 2  (predict for XP_024642260.1)
chlo 7,  nucl 2  (predict for XP_039685849.1)
Subcellular
localization
TargetP
other 4  (predict for XP_024642260.1)
other 4  (predict for XP_039685849.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

mtr-u.5
for
11414844

.

mtr-r.5
for
11414844

.

mtr-m.5
for
11414844

.

gma-u.5
for
100791770

.

ath-u.5
for
AT5G52850

.

vvi-u.5
for
100254325

.

osa-u.5
for
4334879

.

zma-u.5
for
103644348

.


Ortholog ID: 13200
Species ath gma osa zma bra vvi mtr tae tae hvu ghi bna bdi
Symbol AT5G52850 LOC100791770 LOC4334879 LOC103644348 LOC103844759 LOC100254325 LOC11414844 LOC123114518 LOC123124014 LOC123397470 LOC107944431 LOC106442854 LOC100837316
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At5g52850, chloroplastic pentatricopeptide repeat-containing protein At5g52850, chloroplastic pentatricopeptide repeat-containing protein At5g52850, chloroplastic pentatricopeptide repeat-containing protein At5g52850, chloroplastic pentatricopeptide repeat-containing protein At5g52850, chloroplastic pentatricopeptide repeat-containing protein At5g52850, chloroplastic pentatricopeptide repeat-containing protein At5g52850, chloroplastic pentatricopeptide repeat-containing protein At5g52850, chloroplastic pentatricopeptide repeat-containing protein At5g52850, chloroplastic-like pentatricopeptide repeat-containing protein At5g52850, chloroplastic pentatricopeptide repeat-containing protein At5g52850, chloroplastic-like pentatricopeptide repeat-containing protein At5g52850, chloroplastic
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03430 Mismatch repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835362 100791770 4334879 103644348 103844759 100254325 11414844 123114518 123124014 123397470 107944431 106442854 100837316
The preparation time of this page was 0.3 [sec].