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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1  106442854  pentatricopeptide repeat-containing protein At5g52850, chloroplastic-like 
 ath-u.5  AT5G52850  Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5  100791770  pentatricopeptide repeat-containing protein At5g52850, chloroplastic 
 vvi-u.5  100254325  pentatricopeptide repeat-containing protein At5g52850, chloroplastic 
 mtr-u.5  11414844  pentatricopeptide repeat-containing protein At5g52850, chloroplastic 
 osa-u.5  4334879  pentatricopeptide repeat-containing protein At5g52850, chloroplastic 
 zma-u.5  103644348  pentatricopeptide repeat-containing protein At5g52850, chloroplastic 

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Top 50 coexpressed genes to 106442854 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106442854 (bna-r.1 coexpression data)

CoexMap"106442854"


bnaLOC106442854 | Entrez gene ID : 106442854
Species bna ath gma vvi mtr osa zma bdi hvu bra cit ppo sbi sly ghi sot nta cre tae
Paralog 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (870 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (3493 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_013739944.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 2,  cyto 2,  vacu 2,  nucl 1,  E.R. 1,  chlo_mito 1  (predict for XP_013739944.2)
Subcellular
localization
TargetP
other 6  (predict for XP_013739944.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

bna-r.1
for
106442854


ath-u.5
for
AT5G52850


gma-u.5
for
100791770


vvi-u.5
for
100254325


mtr-u.5
for
11414844


osa-u.5
for
4334879


zma-u.5
for
103644348



Ortholog ID: 13200
Species bna bra ath ghi gma vvi mtr osa zma tae tae hvu bdi
Symbol LOC106442854 LOC103844759 AT5G52850 LOC107944431 LOC100791770 LOC100254325 LOC11414844 LOC4334879 LOC103644348 LOC123114518 LOC123124014 LOC123397470 LOC100837316
Function* pentatricopeptide repeat-containing protein At5g52850, chloroplastic-like pentatricopeptide repeat-containing protein At5g52850, chloroplastic Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At5g52850, chloroplastic pentatricopeptide repeat-containing protein At5g52850, chloroplastic pentatricopeptide repeat-containing protein At5g52850, chloroplastic pentatricopeptide repeat-containing protein At5g52850, chloroplastic pentatricopeptide repeat-containing protein At5g52850, chloroplastic pentatricopeptide repeat-containing protein At5g52850, chloroplastic pentatricopeptide repeat-containing protein At5g52850, chloroplastic pentatricopeptide repeat-containing protein At5g52850, chloroplastic pentatricopeptide repeat-containing protein At5g52850, chloroplastic-like pentatricopeptide repeat-containing protein At5g52850, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106442854 103844759 835362 107944431 100791770 100254325 11414844 4334879 103644348 123114518 123124014 123397470 100837316
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