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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5  103644348  pentatricopeptide repeat-containing protein At5g52850, chloroplastic 
 zma-r.6  103644348  pentatricopeptide repeat-containing protein At5g52850, chloroplastic 
 osa-u.5  4334879  pentatricopeptide repeat-containing protein At5g52850, chloroplastic 
 ath-u.5  AT5G52850  Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5  100791770  pentatricopeptide repeat-containing protein At5g52850, chloroplastic 
 vvi-u.5  100254325  pentatricopeptide repeat-containing protein At5g52850, chloroplastic 
 mtr-u.5  11414844  pentatricopeptide repeat-containing protein At5g52850, chloroplastic 

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Top 50 coexpressed genes to 103644348 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103644348 (zma-u.5 coexpression data)

CoexMap"103644348"


zmaLOC103644348 | Entrez gene ID : 103644348
Species zma osa ath gma vvi mtr sly sbi nta bra cre hvu cit bdi ppo sot tae bna ghi
Paralog 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (350 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1549 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4389 genes)  IEA  
Protein XP_023157146.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 2  (predict for XP_023157146.1)
Subcellular
localization
TargetP
mito 4  (predict for XP_023157146.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

zma-u.5
for
103644348

.

zma-r.6
for
103644348

.

osa-u.5
for
4334879

.

ath-u.5
for
AT5G52850

.

gma-u.5
for
100791770

.

vvi-u.5
for
100254325

.

mtr-u.5
for
11414844

.


Ortholog ID: 13200
Species ath gma osa zma bra vvi mtr tae tae hvu ghi bna bdi
Symbol AT5G52850 LOC100791770 LOC4334879 LOC103644348 LOC103844759 LOC100254325 LOC11414844 LOC123114518 LOC123124014 LOC123397470 LOC107944431 LOC106442854 LOC100837316
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At5g52850, chloroplastic pentatricopeptide repeat-containing protein At5g52850, chloroplastic pentatricopeptide repeat-containing protein At5g52850, chloroplastic pentatricopeptide repeat-containing protein At5g52850, chloroplastic pentatricopeptide repeat-containing protein At5g52850, chloroplastic pentatricopeptide repeat-containing protein At5g52850, chloroplastic pentatricopeptide repeat-containing protein At5g52850, chloroplastic pentatricopeptide repeat-containing protein At5g52850, chloroplastic pentatricopeptide repeat-containing protein At5g52850, chloroplastic-like pentatricopeptide repeat-containing protein At5g52850, chloroplastic pentatricopeptide repeat-containing protein At5g52850, chloroplastic-like pentatricopeptide repeat-containing protein At5g52850, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03430 Mismatch repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835362 100791770 4334879 103644348 103844759 100254325 11414844 123114518 123124014 123397470 107944431 106442854 100837316
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