ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-r.7	100806973	pentatricopeptide repeat-containing protein At3g57430, chloroplastic
gma-u.5	100806973	pentatricopeptide repeat-containing protein At3g57430, chloroplastic
mtr-u.5	11431200	pentatricopeptide repeat-containing protein At3g12770
sly-u.5	101265587	putative pentatricopeptide repeat-containing protein At3g23330
sot-r.1	102579044	putative pentatricopeptide repeat-containing protein At3g11460
nta-r.1	107809387	pentatricopeptide repeat-containing protein At5g27110
nta-r.1	107806850	pentatricopeptide repeat-containing protein At5g27110-like
osa-u.5	4343078	pentatricopeptide repeat-containing protein CRR2, chloroplastic
zma-u.5	103632264	putative pentatricopeptide repeat-containing protein At3g23330
tae-r.2	123180457	putative pentatricopeptide repeat-containing protein At3g23330
hvu-r.1	123424951	pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like
sbi-r.1	8059732	pentatricopeptide repeat-containing protein At3g12770
bdi-r.1	100829752	pentatricopeptide repeat-containing protein At3g46790, chloroplastic

Annotation

functional annotation

KEGG

GO BP

GO:0009451 [list] [network] RNA modification

(407 genes)

IEA

GO CC

GO:0043231 [list] [network] intracellular membrane-bounded organelle

(10455 genes)

IEA

GO MF

GO:0003723 [list] [network] RNA binding	(2019 genes)	IEA
GO:0005515 [list] [network] protein binding	(7243 genes)	IEA

Protein

XP_003535458.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, mito 1, nucl 1, cyto 1, plas 1, cyto_nucl 1, cyto_mito 1, nucl_plas 1, cyto_plas 1

(predict for XP_003535458.1)

Subcellular
localization
TargetP

mito 8

(predict for XP_003535458.1)

Gene expression

All samples

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-r.7 for 100806973	gma-u.5 for 100806973	mtr-u.5 for 11431200	sly-u.5 for 101265587	sot-r.1 for 102579044	nta-r.1 for 107809387	nta-r.1 for 107806850	osa-u.5 for 4343078	zma-u.5 for 103632264	tae-r.2 for 123180457	hvu-r.1 for 123424951	sbi-r.1 for 8059732	bdi-r.1 for 100829752