Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1  123424951  pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like 
 osa-u.5  4343078  pentatricopeptide repeat-containing protein CRR2, chloroplastic 
 zma-u.5  103632264  putative pentatricopeptide repeat-containing protein At3g23330 
 gma-u.5  100806973  pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 sly-u.5  101265587  putative pentatricopeptide repeat-containing protein At3g23330 
 mtr-u.5  11431200  pentatricopeptide repeat-containing protein At3g12770 

close


Top 50 coexpressed genes to 123424951 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 123424951 (hvu-r.1 coexpression data)

CoexMap"123424951"


hvuLOC123424951 | Entrez gene ID : 123424951
Species hvu osa zma gma sly mtr bdi bra vvi cit bna ath ppo sbi ghi sot nta cre tae
Paralog 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (393 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1359 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4692 genes)  IEA  
Protein XP_044964569.1 [sequence] [blastp]
XP_044964576.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  plas 4,  E.R. 1  (predict for XP_044964569.1)
chlo 4,  plas 4,  E.R. 1  (predict for XP_044964576.1)
Subcellular
localization
TargetP
chlo 4  (predict for XP_044964569.1)
chlo 4  (predict for XP_044964576.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

hvu-r.1
for
123424951


osa-u.5
for
4343078


zma-u.5
for
103632264


gma-u.5
for
100806973


sly-u.5
for
101265587


mtr-u.5
for
11431200



Ortholog ID: 12998
Species hvu tae bdi osa zma sbi gma sly mtr sot nta nta
Symbol LOC123424951 LOC123180457 LOC100829752 LOC4343078 LOC103632264 LOC8059732 LOC100806973 LOC101265587 LOC11431200 LOC102579044 LOC107809387 LOC107806850
Function* pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like putative pentatricopeptide repeat-containing protein At3g23330 pentatricopeptide repeat-containing protein At3g46790, chloroplastic pentatricopeptide repeat-containing protein CRR2, chloroplastic putative pentatricopeptide repeat-containing protein At3g23330 pentatricopeptide repeat-containing protein At3g12770 pentatricopeptide repeat-containing protein At3g57430, chloroplastic putative pentatricopeptide repeat-containing protein At3g23330 pentatricopeptide repeat-containing protein At3g12770 putative pentatricopeptide repeat-containing protein At3g11460 pentatricopeptide repeat-containing protein At5g27110 pentatricopeptide repeat-containing protein At5g27110-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123424951 123180457 100829752 4343078 103632264 8059732 100806973 101265587 11431200 102579044 107809387 107806850
The preparation time of this page was 0.1 [sec].