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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102579044   putative pentatricopeptide repeat-containing protein At3g11460 
 sly-u.5   101265587   putative pentatricopeptide repeat-containing protein At3g23330 
 gma-u.5   100806973   pentatricopeptide repeat-containing protein At3g57430, chloroplastic 
 mtr-u.5   11431200   pentatricopeptide repeat-containing protein At3g12770 
 osa-u.5   4343078   pentatricopeptide repeat-containing protein CRR2, chloroplastic 
 zma-u.5   103632264   putative pentatricopeptide repeat-containing protein At3g23330 

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Top 50 coexpressed genes to 102579044 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102579044 (sot-r.1 coexpression data)

CoexMap"102579044"


sotLOC102579044 | Entrez gene ID : 102579044    
Species sot sly gma mtr osa zma tae hvu vvi cit bra ghi ppo sbi bdi ath nta bna cre
Paralog 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1335 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4214 genes)  IEA  
Protein XP_015161083.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 5,  mito 3  (predict for XP_015161083.1)
Subcellular
localization
TargetP
mito 5  (predict for XP_015161083.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102579044
sly-u.5
for
101265587
gma-u.5
for
100806973
mtr-u.5
for
11431200
osa-u.5
for
4343078
zma-u.5
for
103632264


Ortholog ID: 12998
Species sot sly nta nta gma mtr osa zma tae hvu sbi bdi
Symbol LOC102579044 LOC101265587 LOC107809387 LOC107806850 LOC100806973 LOC11431200 LOC4343078 LOC103632264 LOC123180457 LOC123424951 LOC8059732 LOC100829752
Function* putative pentatricopeptide repeat-containing protein At3g11460 putative pentatricopeptide repeat-containing protein At3g23330 pentatricopeptide repeat-containing protein At5g27110 pentatricopeptide repeat-containing protein At5g27110-like pentatricopeptide repeat-containing protein At3g57430, chloroplastic pentatricopeptide repeat-containing protein At3g12770 pentatricopeptide repeat-containing protein CRR2, chloroplastic putative pentatricopeptide repeat-containing protein At3g23330 putative pentatricopeptide repeat-containing protein At3g23330 pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like pentatricopeptide repeat-containing protein At3g12770 pentatricopeptide repeat-containing protein At3g46790, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102579044 101265587 107809387 107806850 100806973 11431200 4343078 103632264 123180457 123424951 8059732 100829752
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