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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   SR30   SERINE-ARGININE PROTEIN 30 
 ath-u.5   SR30   SERINE-ARGININE PROTEIN 30 
 ath-r.7   SR30   SERINE-ARGININE PROTEIN 30 
 ath-e.2   SR30   SERINE-ARGININE PROTEIN 30 
 ath-m.4.bio   SR30   SERINE-ARGININE PROTEIN 30 
 ath-m.4.hor   SR30   SERINE-ARGININE PROTEIN 30 
 ath-m.4.lig   SR30   SERINE-ARGININE PROTEIN 30 
 ath-m.4.str   SR30   SERINE-ARGININE PROTEIN 30 
 ath-m.4.tis   SR30   SERINE-ARGININE PROTEIN 30 
 ath-u.5   SR34a   SER/ARG-rich protein 34A 
 ath-u.5   SR34b   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-u.5   SR34   RNA-binding (RRM/RBD/RNP motifs) family protein 
 bra-r.6   103873488   serine/arginine-rich splicing factor SR34A 
 bra-r.6   103871643   serine/arginine-rich splicing factor SR30 
 bra-r.6   103868210   serine/arginine-rich-splicing factor SR34 
 bna-r.1   106347421   serine/arginine-rich splicing factor SR34A 
 bna-r.1   106418716   serine/arginine-rich splicing factor SR34A 
 bna-r.1   106412199   serine/arginine-rich splicing factor SR30 
 ghi-r.1   107904549   serine/arginine-rich splicing factor SR34A 
 ghi-r.1   107893639   serine/arginine-rich splicing factor SR30 
 ghi-r.1   107893284   serine/arginine-rich splicing factor SR30 
 cit-r.1   102615989   serine/arginine-rich splicing factor SR30-like 
 cit-r.1   102626504   serine/arginine-rich-splicing factor SR34 
 cit-r.1   102611169   serine/arginine-rich splicing factor SR34A 
 gma-u.5   100786491   pre-mRNA-splicing factor SF2-like 
 gma-u.5   100789847   serine/arginine-rich-splicing factor SR34 
 gma-u.5   100794282   serine/arginine-rich splicing factor SR30 
 vvi-u.5   100249315   serine/arginine-rich splicing factor SR30 
 vvi-u.5   100853709   serine/arginine-rich splicing factor SR34A 
 vvi-u.5   100255499   serine/arginine-rich-splicing factor SR34 
 ppo-u.5   7462688   serine/arginine-rich-splicing factor SR34 
 ppo-u.5   7481727   serine/arginine-rich splicing factor SR30 
 ppo-u.5   18096446   serine/arginine-rich-splicing factor SR34 
 mtr-u.5   11412312   serine/arginine-rich splicing factor SR30 
 mtr-u.5   11430819   serine/arginine-rich splicing factor SR34A 
 mtr-u.5   11430016   serine/arginine-rich-splicing factor SR34 
 sly-u.5   101247702   serine/arginine-rich splicing factor SR34A 
 sly-u.5   101247256   serine/arginine-rich-splicing factor SR34 
 sly-u.5   101257012   serine/arginine-rich splicing factor SR30 
 sot-r.1   102584103   serine/arginine-rich-splicing factor SR34-like 
 sot-r.1   102592958   serine/arginine-rich-splicing factor SR34-like 
 nta-r.1   107769333   serine/arginine-rich splicing factor SR34A 
 nta-r.1   107784603   serine/arginine-rich splicing factor SR30 
 nta-r.1   107784867   serine/arginine-rich splicing factor SR30 
 osa-u.5   4344256   serine/arginine-rich-splicing factor SR34 
 osa-u.5   4338552   serine/arginine-rich-splicing factor SR34 
 osa-u.5   4332806   serine/arginine-rich-splicing factor SR34 
 zma-u.5   100285019   uncharacterized LOC100285019 
 zma-u.5   100217203   uncharacterized LOC100217203 
 zma-u.5   100284054   pre-mRNA-splicing factor SF2 
 tae-r.2   123051591   serine/arginine-rich-splicing factor SR34 
 tae-r.2   123043736   serine/arginine-rich splicing factor SR30 
 tae-r.2   123053202   serine/arginine-rich-splicing factor SR34 
 hvu-r.1   123448632   serine/arginine-rich splicing factor SR34A-like 
 hvu-r.1   123444166   serine/arginine-rich-splicing factor SR34-like 
 hvu-r.1   123424755   serine/arginine-rich-splicing factor SR34-like 
 sbi-r.1   110430546   serine/arginine-rich-splicing factor SR34-like 
 sbi-r.1   8079637   serine/arginine-rich splicing factor SR30 
 sbi-r.1   8082304   serine/arginine-rich-splicing factor SR34 
 bdi-r.1   100842985   serine/arginine-rich-splicing factor SR34 
 bdi-r.1   100840113   serine/arginine-rich splicing factor SR30 
 bdi-r.1   100834993   serine/arginine-rich-splicing factor SR34 
 cre-r.1   CHLRE_01g026450v5   uncharacterized protein 

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Top 50 coexpressed genes to SR30 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to SR30 (ath-m.9 coexpression data)

CoexMap"837433"


athSR30 | Entrez gene ID : 837433      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 12 3 3 3 3 3 3 3 3 3 2 3 3 3 3 3 3 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03040 [list] [network] Spliceosome (243 genes)
GO BP
GO CC
GO:0005829 [list] [network] cytosol  (2593 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001320500.1 [sequence] [blastp]
NP_172386.3 [sequence] [blastp]
NP_683288.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 3,  extr 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_001320500.1)
cyto 6,  nucl 2,  chlo 1,  extr 1  (predict for NP_172386.3)
cyto 6,  nucl 2,  chlo 1,  mito 1,  extr 1,  chlo_mito 1  (predict for NP_683288.2)
Subcellular
localization
TargetP
other 8,  mito 7  (predict for NP_001320500.1)
other 8,  mito 7  (predict for NP_172386.3)
other 8,  mito 7  (predict for NP_683288.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
SR30
ath-u.5
for
SR30
ath-r.7
for
SR30
ath-e.2
for
SR30
ath-m.4.bio
for
SR30
ath-m.4.hor
for
SR30
ath-m.4.lig
for
SR30
ath-m.4.str
for
SR30
ath-m.4.tis
for
SR30
ath-u.5
for
SR34a
ath-u.5
for
SR34b
ath-u.5
for
SR34
bra-r.6
for
103873488
bra-r.6
for
103871643
bra-r.6
for
103868210
bna-r.1
for
106347421
bna-r.1
for
106418716
bna-r.1
for
106412199
ghi-r.1
for
107904549
ghi-r.1
for
107893639
ghi-r.1
for
107893284
cit-r.1
for
102615989
cit-r.1
for
102626504
cit-r.1
for
102611169
gma-u.5
for
100786491
gma-u.5
for
100789847
gma-u.5
for
100794282
vvi-u.5
for
100249315
vvi-u.5
for
100853709
vvi-u.5
for
100255499
ppo-u.5
for
7462688
ppo-u.5
for
7481727
ppo-u.5
for
18096446
mtr-u.5
for
11412312
mtr-u.5
for
11430819
mtr-u.5
for
11430016
sly-u.5
for
101247702
sly-u.5
for
101247256
sly-u.5
for
101257012
sot-r.1
for
102584103
sot-r.1
for
102592958
nta-r.1
for
107769333
nta-r.1
for
107784603
nta-r.1
for
107784867
osa-u.5
for
4344256
osa-u.5
for
4338552
osa-u.5
for
4332806
zma-u.5
for
100285019
zma-u.5
for
100217203
zma-u.5
for
100284054
tae-r.2
for
123051591
tae-r.2
for
123043736
tae-r.2
for
123053202
hvu-r.1
for
123448632
hvu-r.1
for
123444166
hvu-r.1
for
123424755
sbi-r.1
for
110430546
sbi-r.1
for
8079637
sbi-r.1
for
8082304
bdi-r.1
for
100842985
bdi-r.1
for
100840113
bdi-r.1
for
100834993
cre-r.1
for
CHLRE_01g026450v5


Ortholog ID: 845
Species ath ath ath bra bra bra bna bna bna ghi ghi ghi cit cit cit gma gma gma vvi vvi vvi ppo ppo ppo mtr mtr mtr sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi cre
Symbol SR30 SR34a SR34 LOC103868210 LOC103873059 LOC103836748 LOC106418716 LOC106399770 LOC106347782 LOC107904549 LOC107893284 LOC107919887 LOC102615989 LOC102626504 LOC102611169 LOC100786491 LOC100789847 LOC100800653 LOC100249315 LOC100853709 LOC100255499 LOC7462688 LOC18096446 LOC18103658 LOC11412312 LOC11430819 LOC11430016 LOC101247256 LOC101257012 LOC101257670 LOC102584103 LOC102592958 LOC102581715 LOC107784603 LOC107784867 LOC107799110 LOC4344256 LOC4338552 LOC4332806 LOC100285019 LOC100217203 LOC100284054 LOC123070505 LOC123078916 LOC123129630 LOC123448632 LOC123444166 LOC123424755 LOC110430546 LOC8079637 LOC8082304 LOC100842985 LOC100840113 LOC100834993 CHLRE_01g026450v5
Function* SERINE-ARGININE PROTEIN 30 SER/ARG-rich protein 34A RNA-binding (RRM/RBD/RNP motifs) family protein serine/arginine-rich-splicing factor SR34 serine/arginine-rich splicing factor SR34A serine/arginine-rich-splicing factor SR34 serine/arginine-rich splicing factor SR34A serine/arginine-rich-splicing factor SR34 serine/arginine-rich splicing factor SR34A serine/arginine-rich splicing factor SR34A serine/arginine-rich splicing factor SR30 serine/arginine-rich splicing factor SR30 serine/arginine-rich splicing factor SR30-like serine/arginine-rich-splicing factor SR34 serine/arginine-rich splicing factor SR34A pre-mRNA-splicing factor SF2-like serine/arginine-rich-splicing factor SR34 serine/arginine-rich splicing factor SR34A serine/arginine-rich splicing factor SR30 serine/arginine-rich splicing factor SR34A serine/arginine-rich-splicing factor SR34 serine/arginine-rich-splicing factor SR34 serine/arginine-rich-splicing factor SR34 serine/arginine-rich splicing factor SR34A serine/arginine-rich splicing factor SR30 serine/arginine-rich splicing factor SR34A serine/arginine-rich-splicing factor SR34 serine/arginine-rich-splicing factor SR34 serine/arginine-rich splicing factor SR30 serine/arginine-rich-splicing factor SR34 serine/arginine-rich-splicing factor SR34-like serine/arginine-rich-splicing factor SR34-like serine/arginine-rich splicing factor SR30 serine/arginine-rich splicing factor SR30 serine/arginine-rich splicing factor SR30 serine/arginine-rich splicing factor SR34A serine/arginine-rich-splicing factor SR34 serine/arginine-rich-splicing factor SR34 serine/arginine-rich-splicing factor SR34 uncharacterized LOC100285019 uncharacterized LOC100217203 pre-mRNA-splicing factor SF2 serine/arginine-rich-splicing factor SR34 serine/arginine-rich-splicing factor SR34 serine/arginine-rich-splicing factor SR34 serine/arginine-rich splicing factor SR34A-like serine/arginine-rich-splicing factor SR34-like serine/arginine-rich-splicing factor SR34-like serine/arginine-rich-splicing factor SR34-like serine/arginine-rich splicing factor SR30 serine/arginine-rich-splicing factor SR34 serine/arginine-rich-splicing factor SR34 serine/arginine-rich splicing factor SR30 serine/arginine-rich-splicing factor SR34 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 11
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
bra03013 Nucleocytoplasmic transport 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 10
bna03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 9
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 11
bna03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi00514 Other types of O-glycan biosynthesis 2
ghi03083 Polycomb repressive complex 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi00514 Other types of O-glycan biosynthesis 2
ghi03083 Polycomb repressive complex 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
cit04141 Protein processing in endoplasmic reticulum 2
cit03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 9
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 8
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 9
vvi03013 Nucleocytoplasmic transport 2
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 7
vvi03010 Ribosome 4
vvi00510 N-Glycan biosynthesis 3
vvi00513 Various types of N-glycan biosynthesis 3
vvi04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 6
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 7
mtr03040 Spliceosome 5
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 7
mtr04120 Ubiquitin mediated proteolysis 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 10
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 11
sly03015 mRNA surveillance pathway 7
sly03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 2
nta03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta00250 Alanine, aspartate and glutamate metabolism 2
nta00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04626 Plant-pathogen interaction 3
osa03040 Spliceosome 3
osa04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 6
zma03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 9
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 7
zma03040 Spliceosome 7
zma04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
hvu03015 mRNA surveillance pathway 2
hvu03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 4
bdi00970 Aminoacyl-tRNA biosynthesis 3
bdi03008 Ribosome biogenesis in eukaryotes 3
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 8
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 9
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837433 824105 839262 103868210 103873059 103836748 106418716 106399770 106347782 107904549 107893284 107919887 102615989 102626504 102611169 100786491 100789847 100800653 100249315 100853709 100255499 7462688 18096446 18103658 11412312 11430819 11430016 101247256 101257012 101257670 102584103 102592958 102581715 107784603 107784867 107799110 4344256 4338552 4332806 100285019 100217203 100284054 123070505 123078916 123129630 123448632 123444166 123424755 110430546 8079637 8082304 100842985 100840113 100834993 5715295
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