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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4334879   pentatricopeptide repeat-containing protein At5g52850, chloroplastic 
 osa-r.6   4334879   pentatricopeptide repeat-containing protein At5g52850, chloroplastic 
 osa-m.8   4334879   pentatricopeptide repeat-containing protein At5g52850, chloroplastic 
 osa-e.1   4334879   pentatricopeptide repeat-containing protein At5g52850, chloroplastic 
 zma-u.5   103644348   pentatricopeptide repeat-containing protein At5g52850, chloroplastic 
 ath-u.5   AT5G52850   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100791770   pentatricopeptide repeat-containing protein At5g52850, chloroplastic 
 vvi-u.5   100254325   pentatricopeptide repeat-containing protein At5g52850, chloroplastic 
 mtr-u.5   11414844   pentatricopeptide repeat-containing protein At5g52850, chloroplastic 

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Top 50 coexpressed genes to 4334879 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4334879 (osa-u.5 coexpression data)

CoexMap"4334879"


osaLOC4334879 | Entrez gene ID : 4334879      
Species osa zma ath gma vvi mtr sot hvu tae cit sbi ppo sly ghi cre bna nta bdi bra
Paralog 4 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (252 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (5729 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1223 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4590 genes)  IEA  
Protein XP_015630833.1 [sequence] [blastp]
XP_015630834.1 [sequence] [blastp]
XP_025879895.1 [sequence] [blastp]
XP_066164949.1 [sequence] [blastp]
XP_066164950.1 [sequence] [blastp]
XP_066164951.1 [sequence] [blastp]
XP_066164952.1 [sequence] [blastp]
XP_066164953.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 5,  nucl 3,  chlo_mito 3  (predict for XP_015630833.1)
mito 5,  nucl 3,  chlo_mito 3  (predict for XP_015630834.1)
mito 5,  nucl 3,  chlo_mito 3  (predict for XP_025879895.1)
mito 5,  nucl 3,  chlo_mito 3  (predict for XP_066164949.1)
mito 5,  nucl 3,  chlo_mito 3  (predict for XP_066164950.1)
mito 5,  nucl 3,  chlo_mito 3  (predict for XP_066164951.1)
mito 5,  nucl 3,  chlo_mito 3  (predict for XP_066164952.1)
mito 5,  nucl 3,  chlo_mito 3  (predict for XP_066164953.1)
Subcellular
localization
TargetP
mito 4  (predict for XP_015630833.1)
mito 4  (predict for XP_015630834.1)
mito 4  (predict for XP_025879895.1)
mito 4  (predict for XP_066164949.1)
mito 4  (predict for XP_066164950.1)
mito 4  (predict for XP_066164951.1)
mito 4  (predict for XP_066164952.1)
mito 4  (predict for XP_066164953.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4334879

.
osa-r.6
for
4334879

.
osa-m.8
for
4334879

.
osa-e.1
for
4334879

.
zma-u.5
for
103644348

.
ath-u.5
for
AT5G52850

.
gma-u.5
for
100791770

.
vvi-u.5
for
100254325

.
mtr-u.5
for
11414844

.


Ortholog ID: 13200
Species ath gma osa zma bra vvi mtr tae tae hvu ghi bna bdi
Symbol AT5G52850 LOC100791770 LOC4334879 LOC103644348 LOC103844759 LOC100254325 LOC11414844 LOC123114518 LOC123124014 LOC123397470 LOC107944431 LOC106442854 LOC100837316
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At5g52850, chloroplastic pentatricopeptide repeat-containing protein At5g52850, chloroplastic pentatricopeptide repeat-containing protein At5g52850, chloroplastic pentatricopeptide repeat-containing protein At5g52850, chloroplastic pentatricopeptide repeat-containing protein At5g52850, chloroplastic pentatricopeptide repeat-containing protein At5g52850, chloroplastic pentatricopeptide repeat-containing protein At5g52850, chloroplastic pentatricopeptide repeat-containing protein At5g52850, chloroplastic pentatricopeptide repeat-containing protein At5g52850, chloroplastic-like pentatricopeptide repeat-containing protein At5g52850, chloroplastic pentatricopeptide repeat-containing protein At5g52850, chloroplastic-like pentatricopeptide repeat-containing protein At5g52850, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03430 Mismatch repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835362 100791770 4334879 103644348 103844759 100254325 11414844 123114518 123124014 123397470 107944431 106442854 100837316
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