Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.bio   AFO   Plant-specific transcription factor YABBY family protein 
 ath-u.5   AFO   Plant-specific transcription factor YABBY family protein 
 ath-r.7   AFO   Plant-specific transcription factor YABBY family protein 
 ath-m.9   AFO   Plant-specific transcription factor YABBY family protein 
 ath-e.2   AFO   Plant-specific transcription factor YABBY family protein 
 ath-m.4.hor   AFO   Plant-specific transcription factor YABBY family protein 
 ath-m.4.lig   AFO   Plant-specific transcription factor YABBY family protein 
 ath-m.4.str   AFO   Plant-specific transcription factor YABBY family protein 
 ath-m.4.tis   AFO   Plant-specific transcription factor YABBY family protein 
 bra-r.6   103866196   axial regulator YABBY 1 
 bra-r.6   103830131   axial regulator YABBY 1 
 bna-r.1   106371208   axial regulator YABBY 1-like 
 ghi-r.1   107911900   axial regulator YABBY 1 
 ghi-r.1   107934031   axial regulator YABBY 1 
 ghi-r.1   107954568   axial regulator YABBY 1 
 cit-r.1   102614498   axial regulator YABBY 1 
 cit-r.1   102622362   axial regulator YABBY 1-like 
 gma-u.5   100781267   protein YABBY 3 
 gma-u.5   100786175   protein YABBY 7 
 gma-u.5   100794423   protein YABBY 5 
 vvi-u.5   100267708   protein YABBY 4 
 vvi-u.5   100243667   axial regulator YABBY 1 
 ppo-u.5   7488885   axial regulator YABBY 1 
 ppo-u.5   7465527   protein YABBY 4 
 sly-u.5   YABBY1a   axial regulator YABBY1a 
 sly-u.5   YABBY1b   axial regulator YABBY1b 
 sot-r.1   102577797   protein YABBY 4 
 sot-r.1   102604849   axial regulator YABBY 1 
 nta-r.1   107798917   protein YABBY 4 
 nta-r.1   107802952   axial regulator YABBY 1 
 nta-r.1   107811927   axial regulator YABBY 1 
 osa-u.5   4330130   protein YABBY 4-like 
 osa-u.5   4336518   protein YABBY 5-like 
 zma-u.5   542128   yabby14 
 zma-u.5   100193442   putative YABBY domain transcription factor family protein 
 zma-u.5   542129   protein YABBY 4 
 tae-r.2   123054031   protein YABBY 5 
 tae-r.2   123041704   protein YABBY 5 
 tae-r.2   123127847   protein YABBY 4 
 sbi-r.1   8075170   protein YABBY 4 
 sbi-r.1   8083323   protein YABBY 5 
 bdi-r.1   100845555   protein YABBY 5 
 bdi-r.1   100831851   protein YABBY 4 

close


Top 50 coexpressed genes to AFO (ath-m.4.bio coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AFO (ath-m.4.bio coexpression data)

CoexMap"819127"


athAFO | Entrez gene ID : 819127    
Species ath bra bna ghi cit gma vvi ppo sly sot nta osa zma tae sbi bdi hvu mtr cre
Paralog 9 2 1 3 2 3 2 2 2 2 3 2 3 3 2 2 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0090706 [list] [network] specification of plant organ position  (1 genes)  IMP  
GO:0010450 [list] [network] inflorescence meristem growth  (6 genes)  IMP  
GO:0010158 [list] [network] abaxial cell fate specification  (10 genes)  IGI  
GO:1902183 [list] [network] regulation of shoot apical meristem development  (10 genes)  IMP  
GO:0010093 [list] [network] specification of floral organ identity  (13 genes)  IMP  
GO:2000024 [list] [network] regulation of leaf development  (22 genes)  IMP  
GO:0009944 [list] [network] polarity specification of adaxial/abaxial axis  (23 genes)  IMP  
GO:0009933 [list] [network] meristem structural organization  (56 genes)  IMP  
GO:0045165 [list] [network] cell fate commitment  (79 genes)  IMP  
GO:0009909 [list] [network] regulation of flower development  (163 genes)  IMP  
GO:0010154 [list] [network] fruit development  (807 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM TAS  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (716 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001323472.1 [sequence] [blastp]
NP_566037.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 1,  cyto 1  (predict for NP_001323472.1)
nucl 9,  chlo 1,  cyto 1  (predict for NP_566037.1)
Subcellular
localization
TargetP
mito 5,  other 4  (predict for NP_001323472.1)
other 6,  chlo 4  (predict for NP_566037.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.bio
for
AFO
ath-u.5
for
AFO
ath-r.7
for
AFO
ath-m.9
for
AFO
ath-e.2
for
AFO
ath-m.4.hor
for
AFO
ath-m.4.lig
for
AFO
ath-m.4.str
for
AFO
ath-m.4.tis
for
AFO
bra-r.6
for
103866196
bra-r.6
for
103830131
bna-r.1
for
106371208
ghi-r.1
for
107911900
ghi-r.1
for
107934031
ghi-r.1
for
107954568
cit-r.1
for
102614498
cit-r.1
for
102622362
gma-u.5
for
100781267
gma-u.5
for
100786175
gma-u.5
for
100794423
vvi-u.5
for
100267708
vvi-u.5
for
100243667
ppo-u.5
for
7488885
ppo-u.5
for
7465527
sly-u.5
for
YABBY1a
sly-u.5
for
YABBY1b
sot-r.1
for
102577797
sot-r.1
for
102604849
nta-r.1
for
107798917
nta-r.1
for
107802952
nta-r.1
for
107811927
osa-u.5
for
4330130
osa-u.5
for
4336518
zma-u.5
for
542128
zma-u.5
for
100193442
zma-u.5
for
542129
tae-r.2
for
123054031
tae-r.2
for
123041704
tae-r.2
for
123127847
sbi-r.1
for
8075170
sbi-r.1
for
8083323
bdi-r.1
for
100845555
bdi-r.1
for
100831851


Ortholog ID: 2893
Species ath bra bra bna ghi ghi ghi cit cit gma gma gma vvi vvi ppo ppo sly sly sot sot nta nta nta osa osa zma zma zma tae tae tae sbi sbi bdi bdi
Symbol AFO LOC103866196 LOC103830131 LOC106432121 LOC107934031 LOC121211138 LOC107886089 LOC102614498 LOC102622362 LOC100781267 LOC100794423 FILA LOC100267708 LOC100243667 LOC7488885 LOC7465527 YABBY1a YABBY1b LOC102577797 LOC102604849 LOC107798917 LOC107802952 LOC107811927 LOC4330130 LOC4336518 LOC542128 LOC100193442 LOC542129 LOC123127847 LOC123137614 LOC123189917 LOC8075170 LOC8083323 LOC100845555 LOC100831851
Function* Plant-specific transcription factor YABBY family protein axial regulator YABBY 1 axial regulator YABBY 1 axial regulator YABBY 1 axial regulator YABBY 1 axial regulator YABBY 1 axial regulator YABBY 1 axial regulator YABBY 1 axial regulator YABBY 1-like protein YABBY 3 protein YABBY 5 YABBY protein FILa protein YABBY 4 axial regulator YABBY 1 axial regulator YABBY 1 protein YABBY 4 axial regulator YABBY1a axial regulator YABBY1b protein YABBY 4 axial regulator YABBY 1 protein YABBY 4 axial regulator YABBY 1 axial regulator YABBY 1 protein YABBY 4-like protein YABBY 5-like yabby14 putative YABBY domain transcription factor family protein protein YABBY 4 protein YABBY 4 protein YABBY 4 protein YABBY 5 protein YABBY 4 protein YABBY 5 protein YABBY 5 protein YABBY 4
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi04016 MAPK signaling pathway - plant 2
ghi00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00040 Pentose and glucuronate interconversions 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819127 103866196 103830131 106432121 107934031 121211138 107886089 102614498 102622362 100781267 100794423 100798441 100267708 100243667 7488885 7465527 101246760 101247051 102577797 102604849 107798917 107802952 107811927 4330130 4336518 542128 100193442 542129 123127847 123137614 123189917 8075170 8083323 100845555 100831851
The preparation time of this page was 0.2 [sec].