Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   YABBY1b   axial regulator YABBY1b 
 sly-r.6   YABBY1b   axial regulator YABBY1b 
 sly-u.5   YABBY1a   axial regulator YABBY1a 
 sot-r.1   102577797   protein YABBY 4 
 sot-r.1   102604849   axial regulator YABBY 1 
 nta-r.1   107822998   axial regulator YABBY 1-like 
 nta-r.1   107811927   axial regulator YABBY 1 
 nta-r.1   107802952   axial regulator YABBY 1 
 ath-u.5   AFO   Plant-specific transcription factor YABBY family protein 
 gma-u.5   100781267   protein YABBY 3 
 gma-u.5   100786175   protein YABBY 7 
 gma-u.5   100794423   protein YABBY 5 
 bra-r.6   103866196   axial regulator YABBY 1 
 bra-r.6   103830131   axial regulator YABBY 1 
 vvi-u.5   100243667   axial regulator YABBY 1 
 vvi-u.5   100267708   protein YABBY 4 
 ppo-u.5   18096332   axial regulator YABBY 1 
 ppo-u.5   7465527   protein YABBY 4 
 ghi-r.1   121211138   axial regulator YABBY 1 
 ghi-r.1   107954568   axial regulator YABBY 1 
 ghi-r.1   107934031   axial regulator YABBY 1 
 bna-r.1   106371208   axial regulator YABBY 1-like 
 bna-r.1   106391936   axial regulator YABBY 1-like 
 cit-r.1   102614498   axial regulator YABBY 1 
 cit-r.1   102622362   axial regulator YABBY 1-like 
 osa-u.5   4330130   protein YABBY 4-like 
 osa-u.5   4336518   protein YABBY 5-like 
 zma-u.5   542128   yabby14 
 zma-u.5   100193442   putative YABBY domain transcription factor family protein 
 zma-u.5   542129   protein YABBY 4 
 tae-r.2   123144945   protein YABBY 4 
 tae-r.2   123189917   protein YABBY 5 
 tae-r.2   123137614   protein YABBY 4 
 sbi-r.1   8083323   protein YABBY 5 
 sbi-r.1   8075170   protein YABBY 4 
 bdi-r.1   100845555   protein YABBY 5 
 bdi-r.1   100831851   protein YABBY 4 

close


Top 50 coexpressed genes to YABBY1b (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to YABBY1b (sly-u.5 coexpression data)

CoexMap"101247051"


slyYABBY1b | Entrez gene ID : 101247051      
Species sly sot nta ath gma bra vvi ppo ghi bna cit osa zma tae sbi bdi cre mtr hvu
Paralog 3 2 3 1 3 2 2 2 3 2 2 2 3 3 2 2 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:1902183 [list] [network] regulation of shoot apical meristem development  (2 genes)  IEA  
GO:2000024 [list] [network] regulation of leaf development  (2 genes)  IEA  
GO:0009944 [list] [network] polarity specification of adaxial/abaxial axis  (3 genes)  IEA  
GO:0010158 [list] [network] abaxial cell fate specification  (10 genes)  IEA  
GO:0045165 [list] [network] cell fate commitment  (19 genes)  IEA  
GO:0010154 [list] [network] fruit development  (38 genes)  IEA  
GO:0007275 [list] [network] multicellular organism development  (199 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2947 genes)  IEA  
GO MF
Protein NP_001353824.1 [sequence] [blastp]
XP_025888199.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  chlo 1,  cyto 1  (predict for NP_001353824.1)
nucl 9,  cyto 1,  cysk 1  (predict for XP_025888199.2)
Subcellular
localization
TargetP
chlo 6,  other 6  (predict for NP_001353824.1)
scret 7  (predict for XP_025888199.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
YABBY1b
sly-r.6
for
YABBY1b
sly-u.5
for
YABBY1a
sot-r.1
for
102577797
sot-r.1
for
102604849
nta-r.1
for
107822998
nta-r.1
for
107811927
nta-r.1
for
107802952
ath-u.5
for
AFO
gma-u.5
for
100781267
gma-u.5
for
100786175
gma-u.5
for
100794423
bra-r.6
for
103866196
bra-r.6
for
103830131
vvi-u.5
for
100243667
vvi-u.5
for
100267708
ppo-u.5
for
18096332
ppo-u.5
for
7465527
ghi-r.1
for
121211138
ghi-r.1
for
107954568
ghi-r.1
for
107934031
bna-r.1
for
106371208
bna-r.1
for
106391936
cit-r.1
for
102614498
cit-r.1
for
102622362
osa-u.5
for
4330130
osa-u.5
for
4336518
zma-u.5
for
542128
zma-u.5
for
100193442
zma-u.5
for
542129
tae-r.2
for
123144945
tae-r.2
for
123189917
tae-r.2
for
123137614
sbi-r.1
for
8083323
sbi-r.1
for
8075170
bdi-r.1
for
100845555
bdi-r.1
for
100831851


Ortholog ID: 2893
Species sly sly sot sot nta nta nta ath gma gma gma bra bra vvi vvi ppo ppo ghi ghi ghi bna cit cit osa osa zma zma zma tae tae tae sbi sbi bdi bdi
Symbol YABBY1b YABBY1a LOC102577797 LOC102604849 LOC107811927 LOC107802952 LOC107798917 AFO LOC100781267 LOC100794423 FILA LOC103866196 LOC103830131 LOC100243667 LOC100267708 LOC7465527 LOC7488885 LOC121211138 LOC107934031 LOC107886089 LOC106432121 LOC102614498 LOC102622362 LOC4330130 LOC4336518 LOC542128 LOC100193442 LOC542129 LOC123189917 LOC123137614 LOC123127847 LOC8083323 LOC8075170 LOC100845555 LOC100831851
Function* axial regulator YABBY1b axial regulator YABBY1a protein YABBY 4 axial regulator YABBY 1 axial regulator YABBY 1 axial regulator YABBY 1 protein YABBY 4 Plant-specific transcription factor YABBY family protein protein YABBY 3 protein YABBY 5 YABBY protein FILa axial regulator YABBY 1 axial regulator YABBY 1 axial regulator YABBY 1 protein YABBY 4 protein YABBY 4 axial regulator YABBY 1 axial regulator YABBY 1 axial regulator YABBY 1 axial regulator YABBY 1 axial regulator YABBY 1 axial regulator YABBY 1 axial regulator YABBY 1-like protein YABBY 4-like protein YABBY 5-like yabby14 putative YABBY domain transcription factor family protein protein YABBY 4 protein YABBY 5 protein YABBY 4 protein YABBY 4 protein YABBY 5 protein YABBY 4 protein YABBY 5 protein YABBY 4
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi04016 MAPK signaling pathway - plant 2
ghi00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00040 Pentose and glucuronate interconversions 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101247051 101246760 102577797 102604849 107811927 107802952 107798917 819127 100781267 100794423 100798441 103866196 103830131 100243667 100267708 7465527 7488885 121211138 107934031 107886089 106432121 102614498 102622362 4330130 4336518 542128 100193442 542129 123189917 123137614 123127847 8083323 8075170 100845555 100831851
The preparation time of this page was 0.2 [sec].