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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8060904   60S ribosomal protein L7-2 
 sbi-r.1   110436898   60S ribosomal protein L7-3-like 
 sbi-r.1   8155608   60S ribosomal protein L7-3 
 sbi-r.1   110436942   60S ribosomal protein L7-3-like 
 zma-u.5   100282330   60S ribosomal protein L7-like 
 zma-u.5   100281971   60S ribosomal protein L7-like 
 zma-u.5   100281870   60S ribosomal protein L7-like 
 osa-u.5   4346195   large ribosomal subunit protein uL30z 
 osa-u.5   4345009   large ribosomal subunit protein uL30x 
 osa-u.5   4336914   large ribosomal subunit protein uL30x 
 tae-r.2   123152152   60S ribosomal protein L7-2 
 tae-r.2   123170310   60S ribosomal protein L7-2 
 tae-r.2   123046525   60S ribosomal protein L7-2 
 hvu-r.1   123427688   60S ribosomal protein L7-2-like 
 hvu-r.1   123407350   60S ribosomal protein L7-1-like 
 hvu-r.1   123452832   60S ribosomal protein L7-3-like 
 bdi-r.1   100829357   60S ribosomal protein L7-2 
 bdi-r.1   100829822   60S ribosomal protein L7-2 
 bdi-r.1   100845883   60S ribosomal protein L7-2 
 ath-u.5   AT2G01250   Ribosomal protein L30/L7 family protein 
 ath-u.5   AT2G44120   Ribosomal protein L30/L7 family protein 
 ath-u.5   AT3G13580   Ribosomal protein L30/L7 family protein 
 gma-u.5   100813342   60S ribosomal protein L7-4-like 
 gma-u.5   100500011   60S ribosomal protein L7-4 
 gma-u.5   100500005   ribosomal L30 N-terminal domain-containing protein 
 sly-u.5   101258378   large ribosomal subunit protein uL30y 
 sly-u.5   101268852   large ribosomal subunit protein uL30z 
 sly-u.5   101261844   large ribosomal subunit protein uL30x 
 bra-r.6   103866768   60S ribosomal protein L7-3 
 bra-r.6   103866124   60S ribosomal protein L7-3 
 bra-r.6   103853221   60S ribosomal protein L7-1 
 ppo-u.5   7497794   60S ribosomal protein L7-4 
 ppo-u.5   7487064   60S ribosomal protein L7-1 
 ppo-u.5   7485495   60S ribosomal protein L7-3 
 mtr-u.5   11410884   60S ribosomal protein L7-1 
 mtr-u.5   11440629   60S ribosomal protein L7-2 
 mtr-u.5   25482160   60S ribosomal protein L7-2 
 ghi-r.1   107889272   60S ribosomal protein L7-4 
 ghi-r.1   107891468   60S ribosomal protein L7-2 
 ghi-r.1   107915136   60S ribosomal protein L7-1 
 bna-r.1   106432061   60S ribosomal protein L7-2 
 bna-r.1   106429669   60S ribosomal protein L7-1-like 
 bna-r.1   106429206   60S ribosomal protein L7-3-like 
 sot-r.1   102594660   60S ribosomal protein L7-3 
 sot-r.1   102587452   60S ribosomal protein L7-4 
 sot-r.1   102600208   60S ribosomal protein L7-1 
 cit-r.1   102614577   60S ribosomal protein L7-4-like 
 cit-r.1   102629979   60S ribosomal protein L7-1 
 cit-r.1   102611070   60S ribosomal protein L7-2 
 nta-r.1   107799086   large ribosomal subunit protein uL30w 
 nta-r.1   107762110   large ribosomal subunit protein uL30z 
 nta-r.1   107764206   large ribosomal subunit protein uL30z 
 cre-r.1   CHLRE_12g537800v5   uncharacterized protein 

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Top 50 coexpressed genes to 8060904 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8060904 (sbi-r.1 coexpression data)

CoexMap"8060904"


sbiLOC8060904 | Entrez gene ID : 8060904      
Species sbi zma osa tae hvu bdi ath gma sly bra ppo mtr ghi bna sot cit nta cre vvi
Paralog 4 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03010 [list] [network] Ribosome (360 genes)
GO BP
GO:0000463 [list] [network] maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (20 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (113 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (320 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
Protein XP_002445767.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 8,  cyto_E.R. 4,  E.R._vacu 1  (predict for XP_002445767.1)
Subcellular
localization
TargetP
other 9  (predict for XP_002445767.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8060904
sbi-r.1
for
110436898
sbi-r.1
for
8155608
sbi-r.1
for
110436942
zma-u.5
for
100282330
zma-u.5
for
100281971
zma-u.5
for
100281870
osa-u.5
for
4346195
osa-u.5
for
4345009
osa-u.5
for
4336914
tae-r.2
for
123152152
tae-r.2
for
123170310
tae-r.2
for
123046525
hvu-r.1
for
123427688
hvu-r.1
for
123407350
hvu-r.1
for
123452832
bdi-r.1
for
100829357
bdi-r.1
for
100829822
bdi-r.1
for
100845883
ath-u.5
for
AT2G01250
ath-u.5
for
AT2G44120
ath-u.5
for
AT3G13580
gma-u.5
for
100813342
gma-u.5
for
100500011
gma-u.5
for
100500005
sly-u.5
for
101258378
sly-u.5
for
101268852
sly-u.5
for
101261844
bra-r.6
for
103866768
bra-r.6
for
103866124
bra-r.6
for
103853221
ppo-u.5
for
7497794
ppo-u.5
for
7487064
ppo-u.5
for
7485495
mtr-u.5
for
11410884
mtr-u.5
for
11440629
mtr-u.5
for
25482160
ghi-r.1
for
107889272
ghi-r.1
for
107891468
ghi-r.1
for
107915136
bna-r.1
for
106432061
bna-r.1
for
106429669
bna-r.1
for
106429206
sot-r.1
for
102594660
sot-r.1
for
102587452
sot-r.1
for
102600208
cit-r.1
for
102614577
cit-r.1
for
102629979
cit-r.1
for
102611070
nta-r.1
for
107799086
nta-r.1
for
107762110
nta-r.1
for
107764206
cre-r.1
for
CHLRE_12g537800v5


Ortholog ID: 662
Species sbi sbi sbi zma zma zma osa osa osa tae tae tae hvu hvu hvu bdi bdi bdi ath ath ath gma gma gma sly sly sly bra bra bra vvi vvi vvi ppo ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna sot sot sot cit cit cit nta nta nta cre
Symbol LOC110436898 LOC8155608 LOC110436942 LOC100281971 LOC100281870 LOC100192863 LOC4346195 LOC4345009 LOC4336914 LOC123152152 LOC123170310 LOC123113810 LOC123427688 LOC123407350 LOC123452832 LOC100829357 LOC100829822 LOC100845883 AT2G01250 AT2G44120 AT3G13580 LOC100813342 LOC100500005 LOC100305682 LOC101268852 LOC101261844 LOC101260624 LOC103866124 LOC103839500 LOC103827596 LOC104880426 LOC100245039 LOC100267028 LOC7497794 LOC7485495 LOC7478297 LOC11410884 LOC25482160 LOC25491242 LOC107891468 LOC107949068 LOC107889153 LOC106429206 LOC111198762 LOC106436885 LOC102587452 LOC102600208 LOC102577695 LOC102614577 LOC102629979 LOC102611070 LOC107767555 LOC107767309 LOC107814165 CHLRE_12g537800v5
Function* 60S ribosomal protein L7-3-like 60S ribosomal protein L7-3 60S ribosomal protein L7-3-like 60S ribosomal protein L7-like 60S ribosomal protein L7-like 60S ribosomal protein L7-like large ribosomal subunit protein uL30z large ribosomal subunit protein uL30x large ribosomal subunit protein uL30x 60S ribosomal protein L7-2 60S ribosomal protein L7-2 60S ribosomal protein L7-2 60S ribosomal protein L7-2-like 60S ribosomal protein L7-1-like 60S ribosomal protein L7-3-like 60S ribosomal protein L7-2 60S ribosomal protein L7-2 60S ribosomal protein L7-2 Ribosomal protein L30/L7 family protein Ribosomal protein L30/L7 family protein Ribosomal protein L30/L7 family protein 60S ribosomal protein L7-4-like ribosomal L30 N-terminal domain-containing protein ribosomal protein L30/L7 family protein large ribosomal subunit protein uL30z large ribosomal subunit protein uL30x large ribosomal subunit protein uL30w 60S ribosomal protein L7-3 60S ribosomal protein L7-2 60S ribosomal protein L7-2 large ribosomal subunit protein uL30y large ribosomal subunit protein uL30y large ribosomal subunit protein uL30y 60S ribosomal protein L7-4 60S ribosomal protein L7-3 60S ribosomal protein L7-1 60S ribosomal protein L7-1 60S ribosomal protein L7-2 60S ribosomal protein L7-4 60S ribosomal protein L7-2 60S ribosomal protein L7-4 60S ribosomal protein L7-4 60S ribosomal protein L7-3-like 60S ribosomal protein L7-2 60S ribosomal protein L7-2 60S ribosomal protein L7-4 60S ribosomal protein L7-1 putative 60S ribosomal protein L7-like protein 60S ribosomal protein L7-4-like 60S ribosomal protein L7-1 60S ribosomal protein L7-2 large ribosomal subunit protein uL30w-like large ribosomal subunit protein uL30y-like large ribosomal subunit protein uL30w-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 13
zma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
osa03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
tae03020 RNA polymerase 2
tae03420 Nucleotide excision repair 2
tae03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 9
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
bdi03040 Spliceosome 3
bdi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 6
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly03010 Ribosome 3
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 18
sly03008 Ribosome biogenesis in eukaryotes 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 5
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 13
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 13
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
nta03040 Spliceosome 3
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 20
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 110436898 8155608 110436942 100281971 100281870 100192863 4346195 4345009 4336914 123152152 123170310 123113810 123427688 123407350 123452832 100829357 100829822 100845883 814652 819018 820560 100813342 100500005 100305682 101268852 101261844 101260624 103866124 103839500 103827596 104880426 100245039 100267028 7497794 7485495 7478297 11410884 25482160 25491242 107891468 107949068 107889153 106429206 111198762 106436885 102587452 102600208 102577695 102614577 102629979 102611070 107767555 107767309 107814165 5718458
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