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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8060904   60S ribosomal protein L7-2 
 zma-u.5   100282330   60S ribosomal protein L7-like 
 zma-u.5   100281971   60S ribosomal protein L7-like 
 zma-u.5   100281870   60S ribosomal protein L7-like 
 osa-u.5   4346195   large ribosomal subunit protein uL30z 
 osa-u.5   4345009   large ribosomal subunit protein uL30x 
 osa-u.5   4336914   large ribosomal subunit protein uL30x 
 ath-u.5   AT2G01250   Ribosomal protein L30/L7 family protein 
 ath-u.5   AT2G44120   Ribosomal protein L30/L7 family protein 
 ath-u.5   AT3G13580   Ribosomal protein L30/L7 family protein 
 gma-u.5   100813342   60S ribosomal protein L7-4-like 
 gma-u.5   100500011   60S ribosomal protein L7-4 
 gma-u.5   100500005   ribosomal L30 N-terminal domain-containing protein 
 sly-u.5   101258378   large ribosomal subunit protein uL30y 
 sly-u.5   101268852   large ribosomal subunit protein uL30z 
 sly-u.5   101261844   large ribosomal subunit protein uL30x 
 ppo-u.5   7497794   60S ribosomal protein L7-4 
 ppo-u.5   7487064   60S ribosomal protein L7-1 
 ppo-u.5   7485495   60S ribosomal protein L7-3 
 mtr-u.5   11410884   60S ribosomal protein L7-1 
 mtr-u.5   11440629   60S ribosomal protein L7-2 
 mtr-u.5   25482160   60S ribosomal protein L7-2 

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Top 50 coexpressed genes to 8060904 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8060904 (sbi-r.1 coexpression data)

CoexMap"8060904"


sbiLOC8060904 | Entrez gene ID : 8060904      
Species sbi zma osa ath gma sly ppo mtr bra nta cre vvi cit hvu bdi sot tae bna ghi
Paralog 1 3 3 3 3 3 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03010 [list] [network] Ribosome (360 genes)
GO BP
GO:0000463 [list] [network] maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (20 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (113 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (320 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
Protein XP_002445767.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 8,  cyto_E.R. 4,  E.R._vacu 1  (predict for XP_002445767.1)
Subcellular
localization
TargetP
other 9  (predict for XP_002445767.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8060904

.
zma-u.5
for
100282330

.
zma-u.5
for
100281971

.
zma-u.5
for
100281870

.
osa-u.5
for
4346195

.
osa-u.5
for
4345009

.
osa-u.5
for
4336914

.
ath-u.5
for
AT2G01250

.
ath-u.5
for
AT2G44120

.
ath-u.5
for
AT3G13580

.
gma-u.5
for
100813342

.
gma-u.5
for
100500011

.
gma-u.5
for
100500005

.
sly-u.5
for
101258378

.
sly-u.5
for
101268852

.
sly-u.5
for
101261844

.
ppo-u.5
for
7497794

.
ppo-u.5
for
7487064

.
ppo-u.5
for
7485495

.
mtr-u.5
for
11410884

.
mtr-u.5
for
11440629

.
mtr-u.5
for
25482160

.


Ortholog ID: 662
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AT2G01250 AT2G44120 LOC100305682 LOC100813342 LOC101261844 LOC101260624 LOC4336914 LOC4346195 LOC100281870 LOC100192863 LOC103839500 LOC103866124 LOC100267028 LOC104880426 LOC7478297 LOC7485495 LOC25491242 LOC25482160 LOC123170310 LOC123152152 LOC123427688 LOC123452832 LOC107889153 LOC107949068 LOC106436885 LOC106429206 CHLRE_12g537800v5 LOC110436898 LOC110436942 LOC102600208 LOC102577695 LOC102614577 LOC102629979 LOC100845883 LOC100829822 LOC107767555 LOC107767309
Function* Ribosomal protein L30/L7 family protein Ribosomal protein L30/L7 family protein ribosomal protein L30/L7 family protein 60S ribosomal protein L7-4-like large ribosomal subunit protein uL30x large ribosomal subunit protein uL30w large ribosomal subunit protein uL30x large ribosomal subunit protein uL30z 60S ribosomal protein L7-like 60S ribosomal protein L7-like 60S ribosomal protein L7-2 60S ribosomal protein L7-3 large ribosomal subunit protein uL30y large ribosomal subunit protein uL30y 60S ribosomal protein L7-1 60S ribosomal protein L7-3 60S ribosomal protein L7-4 60S ribosomal protein L7-2 60S ribosomal protein L7-2 60S ribosomal protein L7-2 60S ribosomal protein L7-2-like 60S ribosomal protein L7-3-like 60S ribosomal protein L7-4 60S ribosomal protein L7-4 60S ribosomal protein L7-2 60S ribosomal protein L7-3-like uncharacterized protein 60S ribosomal protein L7-3-like 60S ribosomal protein L7-3-like 60S ribosomal protein L7-1 putative 60S ribosomal protein L7-like protein 60S ribosomal protein L7-4-like 60S ribosomal protein L7-1 60S ribosomal protein L7-2 60S ribosomal protein L7-2 large ribosomal subunit protein uL30w-like large ribosomal subunit protein uL30y-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 18
sly03008 Ribosome biogenesis in eukaryotes 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
osa03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 5
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 13
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
tae03020 RNA polymerase 2
tae03420 Nucleotide excision repair 2
tae03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 13
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
bdi03040 Spliceosome 3
bdi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
nta03040 Spliceosome 3
nta03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 814652 819018 100305682 100813342 101261844 101260624 4336914 4346195 100281870 100192863 103839500 103866124 100267028 104880426 7478297 7485495 25491242 25482160 123170310 123152152 123427688 123452832 107889153 107949068 106436885 106429206 5718458 110436898 110436942 102600208 102577695 102614577 102629979 100845883 100829822 107767555 107767309
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