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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106434321   mediator of RNA polymerase II transcription subunit 11 
 bna-r.1   125587605   mediator of RNA polymerase II transcription subunit 11-like 
 bna-r.1   106433429   mediator of RNA polymerase II transcription subunit 11 
 bra-r.6   103850069   mediator of RNA polymerase II transcription subunit 11 
 bra-r.6   103870980   mediator of RNA polymerase II transcription subunit 11 
 ath-u.5   AT3G01435   uncharacterized protein 
 ghi-r.1   107961942   mediator of RNA polymerase II transcription subunit 11 
 ghi-r.1   107910070   mediator of RNA polymerase II transcription subunit 11 
 cit-r.1   102607294   mediator of RNA polymerase II transcription subunit 11 
 gma-u.5   100306257   uncharacterized LOC100306257 
 gma-u.5   100792126   mediator of RNA polymerase II transcription subunit 11 
 vvi-u.5   100255926   mediator of RNA polymerase II transcription subunit 11 
 ppo-u.5   18097318   mediator of RNA polymerase II transcription subunit 11 
 mtr-u.5   11414265   mediator of RNA polymerase II transcription subunit 11 
 mtr-u.5   11413700   mediator of RNA polymerase II transcription subunit 11 
 sly-u.5   101262909   mediator of RNA polymerase II transcription subunit 11 
 sot-r.1   102599143   mediator of RNA polymerase II transcription subunit 11 
 nta-r.1   107788739   mediator of RNA polymerase II transcription subunit 11 
 nta-r.1   107770332   mediator of RNA polymerase II transcription subunit 11-like 
 nta-r.1   107773720   mediator of RNA polymerase II transcription subunit 11 
 osa-u.5   4330605   mediator of RNA polymerase II transcription subunit 11 
 osa-u.5   4328559   mediator of RNA polymerase II transcription subunit 11 
 zma-u.5   100279588   uncharacterized LOC100279588 
 zma-u.5   100277150   Mediator of RNA polymerase II transcription subunit 11 
 tae-r.2   123127215   mediator of RNA polymerase II transcription subunit 11 
 tae-r.2   123136813   mediator of RNA polymerase II transcription subunit 11 
 tae-r.2   123144298   mediator of RNA polymerase II transcription subunit 11 
 hvu-r.1   123403385   mediator of RNA polymerase II transcription subunit 11-like 
 hvu-r.1   123410422   mediator of RNA polymerase II transcription subunit 11-like 
 hvu-r.1   123426023   mediator of RNA polymerase II transcription subunit 11-like 
 sbi-r.1   8077657   mediator of RNA polymerase II transcription subunit 11 
 sbi-r.1   8079437   mediator of RNA polymerase II transcription subunit 11 
 bdi-r.1   100831854   mediator of RNA polymerase II transcription subunit 11 

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Top 50 coexpressed genes to 106434321 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106434321 (bna-r.1 coexpression data)

CoexMap""


bnaLOC106434321 | Entrez gene ID : 106434321    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 2 1 2 1 2 1 1 2 1 1 3 2 2 3 3 2 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
Function mediator of RNA polymerase II transcription subunit 11
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (1371 genes)  IEA  
GO CC
GO:0016592 [list] [network] mediator complex  (98 genes)  IEA  
GO MF
GO:0003712 [list] [network] transcription coregulator activity  (379 genes)  IEA  
Protein XP_013730613.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1,  cyto 1,  mito 1,  cyto_nucl 1  (predict for XP_013730613.2)
Subcellular
localization
TargetP
mito 5,  other 4  (predict for XP_013730613.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106434321
bna-r.1
for
125587605
bna-r.1
for
106433429
bra-r.6
for
103850069
bra-r.6
for
103870980
ath-u.5
for
AT3G01435
ghi-r.1
for
107961942
ghi-r.1
for
107910070
cit-r.1
for
102607294
gma-u.5
for
100306257
gma-u.5
for
100792126
vvi-u.5
for
100255926
ppo-u.5
for
18097318
mtr-u.5
for
11414265
mtr-u.5
for
11413700
sly-u.5
for
101262909
sot-r.1
for
102599143
nta-r.1
for
107788739
nta-r.1
for
107770332
nta-r.1
for
107773720
osa-u.5
for
4330605
osa-u.5
for
4328559
zma-u.5
for
100279588
zma-u.5
for
100277150
tae-r.2
for
123127215
tae-r.2
for
123136813
tae-r.2
for
123144298
hvu-r.1
for
123403385
hvu-r.1
for
123410422
hvu-r.1
for
123426023
sbi-r.1
for
8077657
sbi-r.1
for
8079437
bdi-r.1
for
100831854

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Ortholog ID: 5919
Species bna bna bna bra bra ath ghi ghi cit gma gma vvi ppo mtr mtr sly sot nta nta nta osa osa zma zma tae tae tae hvu hvu hvu sbi sbi bdi
Symbol LOC106434321 LOC125587605 LOC106433429 LOC103850069 LOC103870980 AT3G01435 LOC107961942 LOC107910070 LOC102607294 LOC100306257 LOC100792126 LOC100255926 LOC18097318 LOC11414265 LOC11413700 LOC101262909 LOC102599143 LOC107788739 LOC107773720 LOC107785314 LOC4330605 LOC4328559 LOC100279588 LOC100277150 LOC123136813 LOC123144298 LOC123161097 LOC123403385 LOC123410422 LOC123426023 LOC8077657 LOC8079437 LOC100831854
Function* mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11-like mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 uncharacterized protein mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 uncharacterized LOC100306257 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11-like mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 uncharacterized LOC100279588 Mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11-like mediator of RNA polymerase II transcription subunit 11-like mediator of RNA polymerase II transcription subunit 11-like mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 5
bna04145 Phagosome 4
bna03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 6
bna04145 Phagosome 4
bna03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 2
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 3
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 9
ghi00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 9
ghi00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 2
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma03018 RNA degradation 2
gma03010 Ribosome 2
gma04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03015 mRNA surveillance pathway 2
gma04136 Autophagy - other 2
gma04382 Cornified envelope formation 2
gma00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 6
vvi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
tae03020 RNA polymerase 3
tae03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
sbi03050 Proteasome 4
sbi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 7
bdi03040 Spliceosome 4
bdi04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106434321 125587605 106433429 103850069 103870980 2745869 107961942 107910070 102607294 100306257 100792126 100255926 18097318 11414265 11413700 101262909 102599143 107788739 107773720 107785314 4330605 4328559 100279588 100277150 123136813 123144298 123161097 123403385 123410422 123426023 8077657 8079437 100831854
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