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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11413700   mediator of RNA polymerase II transcription subunit 11 
 mtr-r.5   11413700   mediator of RNA polymerase II transcription subunit 11 
 mtr-u.5   11414265   mediator of RNA polymerase II transcription subunit 11 
 gma-u.5   100306257   uncharacterized LOC100306257 
 gma-u.5   100792126   mediator of RNA polymerase II transcription subunit 11 
 ppo-u.5   18097318   mediator of RNA polymerase II transcription subunit 11 
 ath-u.5   AT3G01435   uncharacterized protein 
 vvi-u.5   100255926   mediator of RNA polymerase II transcription subunit 11 
 sly-u.5   101262909   mediator of RNA polymerase II transcription subunit 11 
 osa-u.5   4330605   mediator of RNA polymerase II transcription subunit 11 
 osa-u.5   4328559   mediator of RNA polymerase II transcription subunit 11 
 zma-u.5   100277150   Mediator of RNA polymerase II transcription subunit 11 
 zma-u.5   100279588   uncharacterized LOC100279588 

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Top 50 coexpressed genes to 11413700 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11413700 (mtr-u.5 coexpression data)

CoexMap"11413700"


mtrLOC11413700 | Entrez gene ID : 11413700      
Species mtr gma ppo ath vvi sly osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 3 2 1 1 1 1 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (425 genes)  IEA  
GO CC
GO:0016592 [list] [network] mediator complex  (47 genes)  IEA  
GO MF
GO:0003712 [list] [network] transcription coregulator activity  (162 genes)  IEA  
Protein XP_003631037.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 4,  nucl 1,  cysk_nucl 1  (predict for XP_003631037.2)
Subcellular
localization
TargetP
other 6,  mito 3  (predict for XP_003631037.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11413700

.
mtr-r.5
for
11413700

.
mtr-u.5
for
11414265

.
gma-u.5
for
100306257

.
gma-u.5
for
100792126

.
ppo-u.5
for
18097318

.
ath-u.5
for
AT3G01435

.
vvi-u.5
for
100255926

.
sly-u.5
for
101262909

.
osa-u.5
for
4330605

.
osa-u.5
for
4328559

.
zma-u.5
for
100277150

.
zma-u.5
for
100279588

.


Ortholog ID: 5919
Species ath gma gma sly osa osa zma zma bra bra vvi ppo mtr mtr tae tae hvu hvu ghi ghi bna bna sbi sbi sot cit bdi nta nta
Symbol AT3G01435 LOC100792126 LOC100306257 LOC101262909 LOC4330605 LOC4328559 LOC100279588 LOC100277150 LOC103870980 LOC103850069 LOC100255926 LOC18097318 LOC11413700 LOC11414265 LOC123161097 LOC123136813 LOC123403385 LOC123426023 LOC107961942 LOC107910070 LOC106434321 LOC106433429 LOC8079437 LOC8077657 LOC102599143 LOC102607294 LOC100831854 LOC107773720 LOC107785314
Function* uncharacterized protein mediator of RNA polymerase II transcription subunit 11 uncharacterized LOC100306257 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 uncharacterized LOC100279588 Mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11-like mediator of RNA polymerase II transcription subunit 11-like mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11 mediator of RNA polymerase II transcription subunit 11-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03015 mRNA surveillance pathway 2
gma04136 Autophagy - other 2
gma04382 Cornified envelope formation 2
gma00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma03018 RNA degradation 2
gma03010 Ribosome 2
gma04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 3
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 6
vvi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
tae03020 RNA polymerase 3
tae03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 9
ghi00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 9
ghi00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 5
bna04145 Phagosome 4
bna03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 2
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
sbi03050 Proteasome 4
sbi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 2
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 7
bdi03040 Spliceosome 4
bdi04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 2745869 100792126 100306257 101262909 4330605 4328559 100279588 100277150 103870980 103850069 100255926 18097318 11413700 11414265 123161097 123136813 123403385 123426023 107961942 107910070 106434321 106433429 8079437 8077657 102599143 102607294 100831854 107773720 107785314
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