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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-r.7   AT5G62460   RING/FYVE/PHD zinc finger superfamily protein 
 ath-u.5   AT5G62460   RING/FYVE/PHD zinc finger superfamily protein 
 ath-m.9   AT5G62460   RING/FYVE/PHD zinc finger superfamily protein 
 ath-e.2   AT5G62460   RING/FYVE/PHD zinc finger superfamily protein 
 ath-m.4.bio   AT5G62460   RING/FYVE/PHD zinc finger superfamily protein 
 ath-m.4.hor   AT5G62460   RING/FYVE/PHD zinc finger superfamily protein 
 ath-m.4.lig   AT5G62460   RING/FYVE/PHD zinc finger superfamily protein 
 ath-m.4.str   AT5G62460   RING/FYVE/PHD zinc finger superfamily protein 
 ath-m.4.tis   AT5G62460   RING/FYVE/PHD zinc finger superfamily protein 
 ath-u.5   AT2G02960   RING/FYVE/PHD zinc finger superfamily protein 
 ath-u.5   AT3G47550   RING/FYVE/PHD zinc finger superfamily protein 
 bra-r.6   103874679   uncharacterized LOC103874679 
 bra-r.6   103873230   uncharacterized LOC103873230 
 bra-r.6   103872120   uncharacterized LOC103872120 
 bna-r.1   106369016   uncharacterized LOC106369016 
 ghi-r.1   107912131   uncharacterized LOC107912131 
 ghi-r.1   107912130   uncharacterized LOC107912130 
 cit-r.1   102616509   hypothetical protein 
 cit-r.1   102616298   uncharacterized LOC102616298 
 cit-r.1   102626552   hypothetical protein 
 gma-u.5   100812120   uncharacterized LOC100812120 
 gma-u.5   100812998   uncharacterized LOC100812998 
 gma-u.5   100817542   uncharacterized LOC100817542 
 vvi-u.5   100259487   uncharacterized LOC100259487 
 vvi-u.5   100258737   uncharacterized LOC100258737 
 vvi-u.5   100256824   uncharacterized LOC100256824 
 ppo-u.5   18104586   uncharacterized LOC18104586 
 ppo-u.5   18099418   uncharacterized LOC18099418 
 ppo-u.5   7475543   uncharacterized LOC7475543 
 mtr-u.5   11418055   uncharacterized LOC11418055 
 mtr-u.5   11421871   uncharacterized LOC11421871 
 mtr-u.5   25502689   uncharacterized LOC25502689 
 sly-u.5   101267890   uncharacterized LOC101267890 
 sly-u.5   101247951   uncharacterized LOC101247951 
 sot-r.1   102588122   uncharacterized LOC102588122 
 sot-r.1   102604544   uncharacterized LOC102604544 
 nta-r.1   107800289   uncharacterized LOC107800289 
 nta-r.1   107794884   uncharacterized LOC107794884 
 nta-r.1   107793813   uncharacterized LOC107793813 
 osa-u.5   4324964   uncharacterized LOC4324964 
 osa-u.5   4326041   uncharacterized LOC4326041 
 osa-u.5   4329759   uncharacterized LOC4329759 
 zma-u.5   100194121   uncharacterized LOC100194121 
 zma-u.5   103636408   uncharacterized LOC103636408 
 tae-r.2   123091853   uncharacterized LOC123091853 
 tae-r.2   123058910   uncharacterized LOC123058910 
 hvu-r.1   123398312   uncharacterized LOC123398312 
 hvu-r.1   123448344   uncharacterized LOC123448344 
 sbi-r.1   8079045   uncharacterized LOC8079045 
 sbi-r.1   110435737   uncharacterized LOC110435737 
 sbi-r.1   110435038   uncharacterized LOC110435038 
 bdi-r.1   100843600   uncharacterized LOC100843600 
 bdi-r.1   100834851   uncharacterized LOC100834851 
 bdi-r.1   100838110   uncharacterized LOC100838110 
 cre-r.1   CHLRE_09g400738v5   uncharacterized protein 

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Top 50 coexpressed genes to AT5G62460 (ath-r.7 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G62460 (ath-r.7 coexpression data)

CoexMap"836366"


athAT5G62460 | Entrez gene ID : 836366      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 11 3 1 2 3 3 3 3 3 2 2 3 3 2 2 2 3 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0071472 [list] [network] cellular response to salt stress  (42 genes)  IMP  
GO:0071470 [list] [network] cellular response to osmotic stress  (57 genes)  IMP  
GO CC
GO:0005886 [list] [network] plasma membrane  (2598 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  IDA  
GO MF
GO:0008270 [list] [network] zinc ion binding  (391 genes)  IEA  
Protein NP_001330073.1 [sequence] [blastp]
NP_001330074.1 [sequence] [blastp]
NP_568953.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  nucl_plas 3,  chlo 2,  cyto 1,  plas 1,  chlo_mito 1  (predict for NP_001330073.1)
nucl 4,  chlo 1,  cyto 1,  mito 1,  plas 1,  extr 1,  golg 1,  golg_plas 1,  cyto_pero 1,  mito_plas 1,  cyto_E.R. 1  (predict for NP_001330074.1)
nucl 4,  nucl_plas 3,  chlo 2,  cyto 1,  plas 1,  chlo_mito 1  (predict for NP_568953.1)
Subcellular
localization
TargetP
chlo 6,  other 5  (predict for NP_001330073.1)
other 7,  chlo 4  (predict for NP_001330074.1)
chlo 6,  other 5  (predict for NP_568953.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-r.7
for
AT5G62460
ath-u.5
for
AT5G62460
ath-m.9
for
AT5G62460
ath-e.2
for
AT5G62460
ath-m.4.bio
for
AT5G62460
ath-m.4.hor
for
AT5G62460
ath-m.4.lig
for
AT5G62460
ath-m.4.str
for
AT5G62460
ath-m.4.tis
for
AT5G62460
ath-u.5
for
AT2G02960
ath-u.5
for
AT3G47550
bra-r.6
for
103874679
bra-r.6
for
103873230
bra-r.6
for
103872120
bna-r.1
for
106369016
ghi-r.1
for
107912131
ghi-r.1
for
107912130
cit-r.1
for
102616509
cit-r.1
for
102616298
cit-r.1
for
102626552
gma-u.5
for
100812120
gma-u.5
for
100812998
gma-u.5
for
100817542
vvi-u.5
for
100259487
vvi-u.5
for
100258737
vvi-u.5
for
100256824
ppo-u.5
for
18104586
ppo-u.5
for
18099418
ppo-u.5
for
7475543
mtr-u.5
for
11418055
mtr-u.5
for
11421871
mtr-u.5
for
25502689
sly-u.5
for
101267890
sly-u.5
for
101247951
sot-r.1
for
102588122
sot-r.1
for
102604544
nta-r.1
for
107800289
nta-r.1
for
107794884
nta-r.1
for
107793813
osa-u.5
for
4324964
osa-u.5
for
4326041
osa-u.5
for
4329759
zma-u.5
for
100194121
zma-u.5
for
103636408
tae-r.2
for
123091853
tae-r.2
for
123058910
hvu-r.1
for
123398312
hvu-r.1
for
123448344
sbi-r.1
for
8079045
sbi-r.1
for
110435737
sbi-r.1
for
110435038
bdi-r.1
for
100843600
bdi-r.1
for
100834851
bdi-r.1
for
100838110
cre-r.1
for
CHLRE_09g400738v5


Ortholog ID: 308
Species ath ath bra bra bna bna ghi ghi cit cit cit gma gma vvi vvi vvi ppo ppo ppo mtr mtr mtr sly sly sot sot sot nta nta osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi cre
Symbol AT5G62460 AT1G14260 LOC103874679 LOC103872120 BNACNNG45990D LOC125591300 LOC107916558 LOC107946515 LOC102616509 LOC102615152 LOC102627455 LOC100812120 LOC100817542 LOC100259487 LOC100256824 LOC100250124 LOC18104586 LOC7475543 LOC7492938 LOC11418055 LOC11421871 LOC11437485 LOC101260808 LOC101256764 LOC102604544 LOC102584648 LOC102602348 LOC107760406 LOC107832834 LOC4324964 LOC4329759 LOC100194121 LOC100284488 LOC100193371 LOC123121689 LOC123096906 LOC123086136 LOC123448344 LOC123445072 LOC123442512 LOC8079045 LOC110435737 LOC110432262 LOC100843600 LOC100834851 LOC100838458 CHLRE_09g400738v5
Function* RING/FYVE/PHD zinc finger superfamily protein RING/FYVE/PHD zinc finger superfamily protein uncharacterized LOC103874679 uncharacterized LOC103872120 uncharacterized BNACNNG45990D uncharacterized LOC125591300 uncharacterized LOC107916558 uncharacterized LOC107946515 hypothetical protein uncharacterized LOC102615152 uncharacterized LOC102627455 uncharacterized LOC100812120 uncharacterized LOC100817542 uncharacterized LOC100259487 uncharacterized LOC100256824 uncharacterized LOC100250124 uncharacterized LOC18104586 uncharacterized LOC7475543 uncharacterized LOC7492938 uncharacterized LOC11418055 uncharacterized LOC11421871 uncharacterized LOC11437485 uncharacterized LOC101260808 uncharacterized LOC101256764 uncharacterized LOC102604544 uncharacterized LOC102584648 uncharacterized LOC102602348 uncharacterized LOC107760406 uncharacterized LOC107832834 uncharacterized LOC4324964 uncharacterized LOC4329759 uncharacterized LOC100194121 protein binding protein uncharacterized LOC100193371 uncharacterized LOC123121689 uncharacterized LOC123096906 uncharacterized LOC123086136 uncharacterized LOC123448344 uncharacterized LOC123445072 uncharacterized LOC123442512 uncharacterized LOC8079045 uncharacterized LOC110435737 uncharacterized LOC110432262 uncharacterized LOC100843600 uncharacterized LOC100834851 uncharacterized LOC100838458 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00561 Glycerolipid metabolism 2
bna04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 4
bna04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04148 Efferocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
ghi03272 Virion - Hepatitis viruses 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 3
cit04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
gma04141 Protein processing in endoplasmic reticulum 2
gma04144 Endocytosis 2
gma00510 N-Glycan biosynthesis 2
gma00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 4
gma04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00562 Inositol phosphate metabolism 2
ppo04070 Phosphatidylinositol signaling system 2
ppo04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 4
sly04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00460 Cyanoamino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 3
sot03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 6
sot00640 Propanoate metabolism 2
sot04075 Plant hormone signal transduction 2
sot00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 3
zma04144 Endocytosis 3
zma03250 Viral life cycle - HIV-1 3
zma03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04145 Phagosome 3
tae04148 Efferocytosis 3
tae04517 IgSF CAM signaling 3
tae04518 Integrin signaling 3
tae04620 Toll-like receptor signaling pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00052 Galactose metabolism 3
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae01250 Biosynthesis of nucleotide sugars 3
tae04075 Plant hormone signal transduction 3
tae04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 3
hvu04144 Endocytosis 3
hvu03083 Polycomb repressive complex 2
hvu04120 Ubiquitin mediated proteolysis 2
hvu04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04142 Lysosome 2
sbi03040 Spliceosome 2
sbi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
bdi03060 Protein export 2
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00062 Fatty acid elongation 2
bdi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 2
cre04145 Phagosome 2
cre04148 Efferocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836366 837987 103874679 103872120 106375442 125591300 107916558 107946515 102616509 102615152 102627455 100812120 100817542 100259487 100256824 100250124 18104586 7475543 7492938 11418055 11421871 11437485 101260808 101256764 102604544 102584648 102602348 107760406 107832834 4324964 4329759 100194121 100284488 100193371 123121689 123096906 123086136 123448344 123445072 123442512 8079045 110435737 110432262 100843600 100834851 100838458 5723150
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