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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G47550   RING/FYVE/PHD zinc finger superfamily protein 
 ath-r.7   AT3G47550   RING/FYVE/PHD zinc finger superfamily protein 
 ath-m.9   AT3G47550   RING/FYVE/PHD zinc finger superfamily protein 
 ath-e.2   AT3G47550   RING/FYVE/PHD zinc finger superfamily protein 
 ath-m.4.bio   AT3G47550   RING/FYVE/PHD zinc finger superfamily protein 
 ath-m.4.hor   AT3G47550   RING/FYVE/PHD zinc finger superfamily protein 
 ath-m.4.lig   AT3G47550   RING/FYVE/PHD zinc finger superfamily protein 
 ath-m.4.str   AT3G47550   RING/FYVE/PHD zinc finger superfamily protein 
 ath-m.4.tis   AT3G47550   RING/FYVE/PHD zinc finger superfamily protein 
 ath-u.5   AT2G02960   RING/FYVE/PHD zinc finger superfamily protein 
 gma-u.5   100812120   uncharacterized LOC100812120 
 gma-u.5   100812998   uncharacterized LOC100812998 
 gma-u.5   100817542   uncharacterized LOC100817542 
 vvi-u.5   100259487   uncharacterized LOC100259487 
 vvi-u.5   100258737   uncharacterized LOC100258737 
 vvi-u.5   100256824   uncharacterized LOC100256824 
 ppo-u.5   18104586   uncharacterized LOC18104586 
 ppo-u.5   18099418   uncharacterized LOC18099418 
 ppo-u.5   7475543   uncharacterized LOC7475543 
 mtr-u.5   11418055   uncharacterized LOC11418055 
 mtr-u.5   11421871   uncharacterized LOC11421871 
 mtr-u.5   25502689   uncharacterized LOC25502689 
 sly-u.5   101267890   uncharacterized LOC101267890 
 sly-u.5   101247951   uncharacterized LOC101247951 
 osa-u.5   4324964   uncharacterized LOC4324964 
 osa-u.5   4326041   uncharacterized LOC4326041 
 osa-u.5   4329759   uncharacterized LOC4329759 
 zma-u.5   100194121   uncharacterized LOC100194121 
 zma-u.5   103636408   uncharacterized LOC103636408 

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Top 50 coexpressed genes to AT3G47550 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G47550 (ath-u.5 coexpression data)

CoexMap"823909"


athAT3G47550 | Entrez gene ID : 823909      
Species ath gma vvi ppo mtr sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 10 3 3 3 3 2 3 2 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  IDA ISM  
GO MF
Protein NP_190339.1 [sequence] [blastp]
NP_850667.1 [sequence] [blastp]
NP_850668.1 [sequence] [blastp]
NP_974396.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 4,  nucl 1,  E.R. 1,  chlo 1,  cyto 1,  extr 1,  vacu 1,  golg 1,  cysk_nucl 1  (predict for NP_190339.1)
cyto 3,  nucl 2,  E.R. 2,  golg 1,  cyto_pero 1,  cyto_plas 1  (predict for NP_850667.1)
plas 4,  nucl 1,  vacu 1,  chlo 1,  extr 1,  E.R. 1,  golg 1,  cyto_nucl 1,  cysk_nucl 1  (predict for NP_850668.1)
plas 4,  nucl 1,  E.R. 1,  chlo 1,  cyto 1,  extr 1,  vacu 1,  golg 1,  cysk_nucl 1  (predict for NP_974396.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for NP_190339.1)
other 8,  chlo 3  (predict for NP_850667.1)
other 8,  chlo 3  (predict for NP_850668.1)
other 8,  chlo 3  (predict for NP_974396.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G47550

.
ath-r.7
for
AT3G47550

.
ath-m.9
for
AT3G47550

.
ath-e.2
for
AT3G47550

.
ath-m.4.bio
for
AT3G47550

.
ath-m.4.hor
for
AT3G47550

.
ath-m.4.lig
for
AT3G47550

.
ath-m.4.str
for
AT3G47550

.
ath-m.4.tis
for
AT3G47550

.
ath-u.5
for
AT2G02960

.
gma-u.5
for
100812120

.
gma-u.5
for
100812998

.
gma-u.5
for
100817542

.
vvi-u.5
for
100259487

.
vvi-u.5
for
100258737

.
vvi-u.5
for
100256824

.
ppo-u.5
for
18104586

.
ppo-u.5
for
18099418

.
ppo-u.5
for
7475543

.
mtr-u.5
for
11418055

.
mtr-u.5
for
11421871

.
mtr-u.5
for
25502689

.
sly-u.5
for
101267890

.
sly-u.5
for
101247951

.
osa-u.5
for
4324964

.
osa-u.5
for
4326041

.
osa-u.5
for
4329759

.
zma-u.5
for
100194121

.
zma-u.5
for
103636408

.


Ortholog ID: 308
Species ath gma sly osa zma zma bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi bna cre sbi sbi sot sot cit cit bdi bdi nta
Symbol AT5G62460 LOC100812120 LOC101260808 LOC4329759 LOC100284488 LOC100194121 LOC103874679 LOC100250124 LOC100256824 LOC18104586 LOC7492938 LOC11437485 LOC11421871 LOC123121689 LOC123086136 LOC123448344 LOC123442512 LOC107916558 LOC125591300 CHLRE_09g400738v5 LOC110432262 LOC110435737 LOC102604544 LOC102584648 LOC102615152 LOC102627455 LOC100834851 LOC100838458 LOC107832834
Function* RING/FYVE/PHD zinc finger superfamily protein uncharacterized LOC100812120 uncharacterized LOC101260808 uncharacterized LOC4329759 protein binding protein uncharacterized LOC100194121 uncharacterized LOC103874679 uncharacterized LOC100250124 uncharacterized LOC100256824 uncharacterized LOC18104586 uncharacterized LOC7492938 uncharacterized LOC11437485 uncharacterized LOC11421871 uncharacterized LOC123121689 uncharacterized LOC123086136 uncharacterized LOC123448344 uncharacterized LOC123442512 uncharacterized LOC107916558 uncharacterized LOC125591300 uncharacterized protein uncharacterized LOC110432262 uncharacterized LOC110435737 uncharacterized LOC102604544 uncharacterized LOC102584648 uncharacterized LOC102615152 uncharacterized LOC102627455 uncharacterized LOC100834851 uncharacterized LOC100838458 uncharacterized LOC107832834
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
gma04141 Protein processing in endoplasmic reticulum 2
gma04144 Endocytosis 2
gma00510 N-Glycan biosynthesis 2
gma00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 4
sly04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04145 Phagosome 3
tae04148 Efferocytosis 3
tae04517 IgSF CAM signaling 3
tae04518 Integrin signaling 3
tae04620 Toll-like receptor signaling pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 3
hvu04144 Endocytosis 3
hvu03083 Polycomb repressive complex 2
hvu04120 Ubiquitin mediated proteolysis 2
hvu04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04148 Efferocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 4
bna04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 2
cre04145 Phagosome 2
cre04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04142 Lysosome 2
sbi03040 Spliceosome 2
sbi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 3
sot03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00062 Fatty acid elongation 2
bdi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836366 100812120 101260808 4329759 100284488 100194121 103874679 100250124 100256824 18104586 7492938 11437485 11421871 123121689 123086136 123448344 123442512 107916558 125591300 5723150 110432262 110435737 102604544 102584648 102615152 102627455 100834851 100838458 107832834
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