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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100192742   uncharacterized LOC100192742 
 zma-r.6   100192742   uncharacterized LOC100192742 
 zma-u.5   100273316   RNA binding (RRM/RBD/RNP motifs) family protein 
 sbi-r.1   8070369   HIV Tat-specific factor 1 homolog 
 sbi-r.1   8083078   splicing factor U2AF-associated protein 2 
 osa-u.5   4336279   splicing factor U2AF-associated protein 2 
 tae-r.2   123189656   splicing factor U2AF-associated protein 2 
 tae-r.2   123053768   splicing factor U2AF-associated protein 2 
 tae-r.2   123045899   splicing factor U2AF-associated protein 2 
 hvu-r.1   123427120   splicing factor U2AF-associated protein 2 
 bdi-r.1   100845144   splicing factor U2AF-associated protein 2 
 ath-u.5   ELF9   RNA binding (RRM/RBD/RNP motifs) family protein 
 gma-u.5   100804655   splicing factor U2AF-associated protein 2 
 gma-u.5   100789709   splicing factor U2AF-associated protein 2 
 sly-u.5   101251141   splicing factor U2AF-associated protein 2 
 bra-r.6   103846340   splicing factor U2AF-associated protein 2 
 vvi-u.5   100853013   uncharacterized LOC100853013 
 ppo-u.5   7462120   splicing factor U2AF-associated protein 2 
 ppo-u.5   7474390   splicing factor U2AF-associated protein 2 
 mtr-u.5   25484593   splicing factor U2AF-associated protein 2 
 ghi-r.1   107951796   HIV Tat-specific factor 1 homolog 
 ghi-r.1   107949539   HIV Tat-specific factor 1 
 bna-r.1   106372015   splicing factor U2AF-associated protein 2 
 bna-r.1   106372209   splicing factor U2AF-associated protein 2 
 sot-r.1   102603870   HIV Tat-specific factor 1 homolog 
 cit-r.1   102610862   splicing factor U2AF-associated protein 2 
 nta-r.1   107830823   uncharacterized LOC107830823 
 nta-r.1   107762319   uncharacterized LOC107762319 
 cre-r.1   CHLRE_17g707050v5   uncharacterized protein 

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Top 50 coexpressed genes to 100192742 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100192742 (zma-u.5 coexpression data)

CoexMap"100192742"


zmaLOC100192742 | Entrez gene ID : 100192742    
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 2 1 3 1 1 1 2 1 1 1 2 1 2 2 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (175 genes)  IEA  
GO CC
GO:0005686 [list] [network] U2 snRNP  (19 genes)  IEA  
GO:0005684 [list] [network] U2-type spliceosomal complex  (51 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1549 genes)  IEA  
Protein NP_001345473.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 3  (predict for NP_001345473.1)
Subcellular
localization
TargetP
other 6  (predict for NP_001345473.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100192742
zma-r.6
for
100192742
zma-u.5
for
100273316
sbi-r.1
for
8070369
sbi-r.1
for
8083078
osa-u.5
for
4336279
tae-r.2
for
123189656
tae-r.2
for
123053768
tae-r.2
for
123045899
hvu-r.1
for
123427120
bdi-r.1
for
100845144
ath-u.5
for
ELF9
gma-u.5
for
100804655
gma-u.5
for
100789709
sly-u.5
for
101251141
bra-r.6
for
103846340
vvi-u.5
for
100853013
ppo-u.5
for
7462120
ppo-u.5
for
7474390
mtr-u.5
for
25484593
ghi-r.1
for
107951796
ghi-r.1
for
107949539
bna-r.1
for
106372015
bna-r.1
for
106372209
sot-r.1
for
102603870
cit-r.1
for
102610862
nta-r.1
for
107830823
nta-r.1
for
107762319
cre-r.1
for
CHLRE_17g707050v5


Ortholog ID: 8601
Species zma zma sbi sbi osa tae tae tae hvu bdi ath gma gma sly bra vvi ppo ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC100192742 LOC100273316 LOC8070369 LOC8083078 LOC4336279 LOC123189656 LOC123053768 LOC123045899 LOC123427120 LOC100845144 ELF9 LOC100804655 LOC100789709 LOC101251141 LOC103846340 LOC100853013 LOC7462120 LOC7474390 LOC25484593 LOC107951796 LOC107949539 LOC106372015 LOC106372209 LOC102603870 LOC102610862 LOC107830823 LOC107762319 CHLRE_17g707050v5
Function* uncharacterized LOC100192742 RNA binding (RRM/RBD/RNP motifs) family protein HIV Tat-specific factor 1 homolog splicing factor U2AF-associated protein 2 splicing factor U2AF-associated protein 2 splicing factor U2AF-associated protein 2 splicing factor U2AF-associated protein 2 splicing factor U2AF-associated protein 2 splicing factor U2AF-associated protein 2 splicing factor U2AF-associated protein 2 RNA binding (RRM/RBD/RNP motifs) family protein splicing factor U2AF-associated protein 2 splicing factor U2AF-associated protein 2 splicing factor U2AF-associated protein 2 splicing factor U2AF-associated protein 2 uncharacterized LOC100853013 splicing factor U2AF-associated protein 2 splicing factor U2AF-associated protein 2 splicing factor U2AF-associated protein 2 HIV Tat-specific factor 1 homolog HIV Tat-specific factor 1 splicing factor U2AF-associated protein 2 splicing factor U2AF-associated protein 2 HIV Tat-specific factor 1 homolog splicing factor U2AF-associated protein 2 uncharacterized LOC107830823 uncharacterized LOC107762319 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
zma03082 ATP-dependent chromatin remodeling 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00620 Pyruvate metabolism 3
tae04120 Ubiquitin mediated proteolysis 3
tae03410 Base excision repair 3
tae00270 Cysteine and methionine metabolism 3
tae00330 Arginine and proline metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00620 Pyruvate metabolism 3
tae04120 Ubiquitin mediated proteolysis 3
tae03410 Base excision repair 3
tae00270 Cysteine and methionine metabolism 3
tae00330 Arginine and proline metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00620 Pyruvate metabolism 3
tae04120 Ubiquitin mediated proteolysis 3
tae00270 Cysteine and methionine metabolism 3
tae00330 Arginine and proline metabolism 3
tae00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
hvu03015 mRNA surveillance pathway 2
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 3
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 3
ath03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
bra03013 Nucleocytoplasmic transport 3
bra03015 mRNA surveillance pathway 3
bra03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 3
mtr04626 Plant-pathogen interaction 3
mtr03010 Ribosome 2
mtr03040 Spliceosome 2
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta01200 Carbon metabolism 3
nta01230 Biosynthesis of amino acids 3
nta03060 Protein export 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta01200 Carbon metabolism 3
nta01230 Biosynthesis of amino acids 3
nta03060 Protein export 2
nta00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 2
cre03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100192742 100273316 8070369 8083078 4336279 123189656 123053768 123045899 123427120 100845144 831486 100804655 100789709 101251141 103846340 100853013 7462120 7474390 25484593 107951796 107949539 106372015 106372209 102603870 102610862 107830823 107762319 66056930
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