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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8070369   HIV Tat-specific factor 1 homolog 
 zma-u.5   100192742   uncharacterized LOC100192742 
 zma-u.5   100273316   RNA binding (RRM/RBD/RNP motifs) family protein 
 osa-u.5   4336279   splicing factor U2AF-associated protein 2 
 ath-u.5   ELF9   RNA binding (RRM/RBD/RNP motifs) family protein 
 gma-u.5   100804655   splicing factor U2AF-associated protein 2 
 gma-u.5   100789709   splicing factor U2AF-associated protein 2 
 sly-u.5   101251141   splicing factor U2AF-associated protein 2 
 vvi-u.5   100853013   uncharacterized LOC100853013 
 ppo-u.5   7462120   splicing factor U2AF-associated protein 2 
 ppo-u.5   7474390   splicing factor U2AF-associated protein 2 
 mtr-u.5   25484593   splicing factor U2AF-associated protein 2 

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Top 50 coexpressed genes to 8070369 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8070369 (sbi-r.1 coexpression data)

CoexMap"8070369"


sbiLOC8070369 | Entrez gene ID : 8070369      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 2 1 1 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (170 genes)  IEA  
GO CC
GO:0005686 [list] [network] U2 snRNP  (25 genes)  IEA  
GO:0005684 [list] [network] U2-type spliceosomal complex  (46 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
Protein XP_002441726.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 8,  chlo 1,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for XP_002441726.1)
Subcellular
localization
TargetP
other 7  (predict for XP_002441726.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8070369

.
zma-u.5
for
100192742

.
zma-u.5
for
100273316

.
osa-u.5
for
4336279

.
ath-u.5
for
ELF9

.
gma-u.5
for
100804655

.
gma-u.5
for
100789709

.
sly-u.5
for
101251141

.
vvi-u.5
for
100853013

.
ppo-u.5
for
7462120

.
ppo-u.5
for
7474390

.
mtr-u.5
for
25484593

.


Ortholog ID: 8601
Species ath gma gma sly osa zma zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sbi sot cit bdi nta nta
Symbol ELF9 LOC100804655 LOC100789709 LOC101251141 LOC4336279 LOC100273316 LOC100192742 LOC103846340 LOC100853013 LOC7474390 LOC7462120 LOC25484593 LOC123045899 LOC123189656 LOC123427120 LOC107951796 LOC107949539 LOC106372209 LOC106372015 CHLRE_17g707050v5 LOC8083078 LOC8070369 LOC102603870 LOC102610862 LOC100845144 LOC107830823 LOC107762319
Function* RNA binding (RRM/RBD/RNP motifs) family protein splicing factor U2AF-associated protein 2 splicing factor U2AF-associated protein 2 splicing factor U2AF-associated protein 2 splicing factor U2AF-associated protein 2 RNA binding (RRM/RBD/RNP motifs) family protein uncharacterized LOC100192742 splicing factor U2AF-associated protein 2 uncharacterized LOC100853013 splicing factor U2AF-associated protein 2 splicing factor U2AF-associated protein 2 splicing factor U2AF-associated protein 2 splicing factor U2AF-associated protein 2 splicing factor U2AF-associated protein 2 splicing factor U2AF-associated protein 2 HIV Tat-specific factor 1 homolog HIV Tat-specific factor 1 splicing factor U2AF-associated protein 2 splicing factor U2AF-associated protein 2 uncharacterized protein splicing factor U2AF-associated protein 2 HIV Tat-specific factor 1 homolog HIV Tat-specific factor 1 homolog splicing factor U2AF-associated protein 2 splicing factor U2AF-associated protein 2 uncharacterized LOC107830823 uncharacterized LOC107762319
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 3
ath03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
zma03082 ATP-dependent chromatin remodeling 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
bra03013 Nucleocytoplasmic transport 3
bra03015 mRNA surveillance pathway 3
bra03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 3
mtr04626 Plant-pathogen interaction 3
mtr03010 Ribosome 2
mtr03040 Spliceosome 2
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00620 Pyruvate metabolism 3
tae04120 Ubiquitin mediated proteolysis 3
tae00270 Cysteine and methionine metabolism 3
tae00330 Arginine and proline metabolism 3
tae00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00620 Pyruvate metabolism 3
tae04120 Ubiquitin mediated proteolysis 3
tae03410 Base excision repair 3
tae00270 Cysteine and methionine metabolism 3
tae00330 Arginine and proline metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
hvu03015 mRNA surveillance pathway 2
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 2
cre03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 3
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta01200 Carbon metabolism 3
nta01230 Biosynthesis of amino acids 3
nta03060 Protein export 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta01200 Carbon metabolism 3
nta01230 Biosynthesis of amino acids 3
nta03060 Protein export 2
nta00270 Cysteine and methionine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831486 100804655 100789709 101251141 4336279 100273316 100192742 103846340 100853013 7474390 7462120 25484593 123045899 123189656 123427120 107951796 107949539 106372209 106372015 66056930 8083078 8070369 102603870 102610862 100845144 107830823 107762319
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