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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107951796   HIV Tat-specific factor 1 homolog 
 ath-u.5   ELF9   RNA binding (RRM/RBD/RNP motifs) family protein 
 gma-u.5   100804655   splicing factor U2AF-associated protein 2 
 gma-u.5   100789709   splicing factor U2AF-associated protein 2 
 vvi-u.5   100853013   uncharacterized LOC100853013 
 ppo-u.5   7474390   splicing factor U2AF-associated protein 2 
 ppo-u.5   7462120   splicing factor U2AF-associated protein 2 
 mtr-u.5   25484593   splicing factor U2AF-associated protein 2 
 sly-u.5   101251141   splicing factor U2AF-associated protein 2 
 osa-u.5   4336279   splicing factor U2AF-associated protein 2 
 zma-u.5   100273316   RNA binding (RRM/RBD/RNP motifs) family protein 
 zma-u.5   100192742   uncharacterized LOC100192742 

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Top 50 coexpressed genes to 107951796 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107951796 (ghi-r.1 coexpression data)

CoexMap"107951796"


ghiLOC107951796 | Entrez gene ID : 107951796    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 1 2 1 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (384 genes)  IEA  
GO CC
GO:0005686 [list] [network] U2 snRNP  (61 genes)  IEA  
GO:0005684 [list] [network] U2-type spliceosomal complex  (104 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (3053 genes)  IEA  
Protein XP_016742424.1 [sequence] [blastp]
XP_016742425.1 [sequence] [blastp]
XP_016742426.1 [sequence] [blastp]
XP_016742427.1 [sequence] [blastp]
XP_016742428.1 [sequence] [blastp]
XP_016742429.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 3,  cyto_nucl 3,  cysk_nucl 3  (predict for XP_016742424.1)
nucl 4,  chlo 3,  cyto_nucl 3,  cysk_nucl 3  (predict for XP_016742425.1)
nucl 6,  chlo 1,  cyto 1,  cysk 1  (predict for XP_016742426.1)
nucl 6,  chlo 1,  cyto 1,  cysk 1  (predict for XP_016742427.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_016742428.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_016742429.1)
Subcellular
localization
TargetP
other 9  (predict for XP_016742424.1)
other 9  (predict for XP_016742425.1)
other 8  (predict for XP_016742426.1)
other 8  (predict for XP_016742427.1)
other 8  (predict for XP_016742428.1)
other 8  (predict for XP_016742429.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107951796
ath-u.5
for
ELF9
gma-u.5
for
100804655
gma-u.5
for
100789709
vvi-u.5
for
100853013
ppo-u.5
for
7474390
ppo-u.5
for
7462120
mtr-u.5
for
25484593
sly-u.5
for
101251141
osa-u.5
for
4336279
zma-u.5
for
100273316
zma-u.5
for
100192742


Ortholog ID: 8601
Species ghi ghi ath bra bna bna cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma zma tae tae hvu sbi sbi bdi cre
Symbol LOC107951796 LOC107949539 ELF9 LOC103846340 LOC106372209 LOC106372015 LOC102610862 LOC100804655 LOC100789709 LOC100853013 LOC7474390 LOC7462120 LOC25484593 LOC101251141 LOC102603870 LOC107830823 LOC107762319 LOC4336279 LOC100273316 LOC100192742 LOC123045899 LOC123189656 LOC123427120 LOC8083078 LOC8070369 LOC100845144 CHLRE_17g707050v5
Function* HIV Tat-specific factor 1 homolog HIV Tat-specific factor 1 RNA binding (RRM/RBD/RNP motifs) family protein splicing factor U2AF-associated protein 2 splicing factor U2AF-associated protein 2 splicing factor U2AF-associated protein 2 splicing factor U2AF-associated protein 2 splicing factor U2AF-associated protein 2 splicing factor U2AF-associated protein 2 uncharacterized LOC100853013 splicing factor U2AF-associated protein 2 splicing factor U2AF-associated protein 2 splicing factor U2AF-associated protein 2 splicing factor U2AF-associated protein 2 HIV Tat-specific factor 1 homolog uncharacterized LOC107830823 uncharacterized LOC107762319 splicing factor U2AF-associated protein 2 RNA binding (RRM/RBD/RNP motifs) family protein uncharacterized LOC100192742 splicing factor U2AF-associated protein 2 splicing factor U2AF-associated protein 2 splicing factor U2AF-associated protein 2 splicing factor U2AF-associated protein 2 HIV Tat-specific factor 1 homolog splicing factor U2AF-associated protein 2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 3
ath03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
bra03013 Nucleocytoplasmic transport 3
bra03015 mRNA surveillance pathway 3
bra03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 3
mtr04626 Plant-pathogen interaction 3
mtr03010 Ribosome 2
mtr03040 Spliceosome 2
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta01200 Carbon metabolism 3
nta01230 Biosynthesis of amino acids 3
nta03060 Protein export 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta01200 Carbon metabolism 3
nta01230 Biosynthesis of amino acids 3
nta03060 Protein export 2
nta00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
zma03082 ATP-dependent chromatin remodeling 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00620 Pyruvate metabolism 3
tae04120 Ubiquitin mediated proteolysis 3
tae00270 Cysteine and methionine metabolism 3
tae00330 Arginine and proline metabolism 3
tae00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00620 Pyruvate metabolism 3
tae04120 Ubiquitin mediated proteolysis 3
tae03410 Base excision repair 3
tae00270 Cysteine and methionine metabolism 3
tae00330 Arginine and proline metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
hvu03015 mRNA surveillance pathway 2
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 3
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 2
cre03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107951796 107949539 831486 103846340 106372209 106372015 102610862 100804655 100789709 100853013 7474390 7462120 25484593 101251141 102603870 107830823 107762319 4336279 100273316 100192742 123045899 123189656 123427120 8083078 8070369 100845144 66056930
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