ATTED-II : GeneCoexpression result

Species	Gene	Description
vvi-u.5	100243511	uncharacterized LOC100243511
vvi-r.5	100243511	uncharacterized LOC100243511
ath-u.5	AT3G15120	P-loop containing nucleoside triphosphate hydrolases superfamily protein
gma-u.5	100817519	uncharacterized LOC100817519
gma-u.5	100803849	uncharacterized LOC100803849
ppo-u.5	7470967	uncharacterized LOC7470967
mtr-u.5	25487297	uncharacterized LOC25487297
sly-u.5	101247940	uncharacterized LOC101247940
osa-u.5	4326327	uncharacterized LOC4326327
zma-u.5	103652548	uncharacterized LOC103652548

functional annotation

KEGG

GO BP

GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II

(126 genes)

IEA

GO CC

GO:0005634 [list] [network] nucleus

(2597 genes)

IEA

GO MF

GO:0042393 [list] [network] histone binding	(43 genes)	IEA
GO:0003682 [list] [network] chromatin binding	(124 genes)	IEA
GO:0016887 [list] [network] ATP hydrolysis activity	(487 genes)	IEA
GO:0005524 [list] [network] ATP binding	(2120 genes)	IEA

Protein

XP_010644166.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, chlo 3, mito 3, chlo_mito 3

(predict for XP_010644166.1)

Subcellular
localization
TargetP

chlo 7

(predict for XP_010644166.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100243511	vvi-r.5 for 100243511	ath-u.5 for AT3G15120	gma-u.5 for 100817519	gma-u.5 for 100803849	ppo-u.5 for 7470967	mtr-u.5 for 25487297	sly-u.5 for 101247940	osa-u.5 for 4326327	zma-u.5 for 103652548

Ortholog ID: 9478

Species

vvi

ath

gma

bra

ppo

mtr

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC100243511

P-loop containing nucleoside triphosphate hydrolases superfamily protein

uncharacterized LOC100803849

uncharacterized LOC100817519

uncharacterized LOC103859609

uncharacterized LOC7470967

uncharacterized LOC25487297

uncharacterized LOC107919975

uncharacterized LOC107939188

uncharacterized BNAC03G38920D

uncharacterized LOC106439398

uncharacterized LOC102619535

uncharacterized LOC101247940

uncharacterized LOC102599159

uncharacterized LOC107793191

uncharacterized LOC107769801

uncharacterized LOC4326327

uncharacterized LOC103652548

uncharacterized LOC123070315

uncharacterized LOC123078771

uncharacterized LOC123441817

uncharacterized LOC8080826

uncharacterized LOC100828996

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	4
ath03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	6
gma03020	RNA polymerase	2
gma03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	4
mtr00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00310	Lysine degradation	5
bna03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00310	Lysine degradation	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	4
cit03015	mRNA surveillance pathway	2
cit03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03082	ATP-dependent chromatin remodeling	2
sly03040	Spliceosome	2
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	3
osa03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03082	ATP-dependent chromatin remodeling	2
tae03020	RNA polymerase	2
tae03420	Nucleotide excision repair	2
tae03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	2
tae03020	RNA polymerase	2
tae03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03013	Nucleocytoplasmic transport	2
hvu03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	4
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04120	Ubiquitin mediated proteolysis	2

Expression

Expression pattern

Entrez Gene ID^*

100243511

820743

100803849

100817519

103859609

7470967

25487297

107919975

107939188

106389189

106439398

102619535

101247940

102599159

107793191

107769801

4326327

103652548

123070315

123078771

123441817

8080826

100828996

5722086

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100243511 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100243511 (vvi-u.5 coexpression data)


Species	vvi	ath	gma	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	2	1	2	1	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100243511 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100243511 (vvi-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**