ATTED-II : GeneCoexpression result

Species	Gene	Description
tae-r.2	123061712	uncharacterized LOC123061712
tae-r.2	123070315	uncharacterized LOC123070315
tae-r.2	123078771	uncharacterized LOC123078771
hvu-r.1	123441817	uncharacterized LOC123441817
bdi-r.1	100828996	uncharacterized LOC100828996
osa-u.5	4326327	uncharacterized LOC4326327
zma-u.5	103652548	uncharacterized LOC103652548
sbi-r.1	8080826	uncharacterized LOC8080826
ath-u.5	AT3G15120	P-loop containing nucleoside triphosphate hydrolases superfamily protein
gma-u.5	100817519	uncharacterized LOC100817519
gma-u.5	100803849	uncharacterized LOC100803849
sly-u.5	101247940	uncharacterized LOC101247940
bra-r.6	103859609	uncharacterized LOC103859609
vvi-u.5	100243511	uncharacterized LOC100243511
ppo-u.5	7470967	uncharacterized LOC7470967
mtr-u.5	25487297	uncharacterized LOC25487297
ghi-r.1	107917757	uncharacterized LOC107917757
ghi-r.1	107939188	uncharacterized LOC107939188
ghi-r.1	107919975	uncharacterized LOC107919975
bna-r.1	BNAC03G38920D	uncharacterized BNAC03G38920D
bna-r.1	106439398	uncharacterized LOC106439398
sot-r.1	102599159	uncharacterized LOC102599159
cit-r.1	102619535	uncharacterized LOC102619535
nta-r.1	107793191	uncharacterized LOC107793191
nta-r.1	107769801	uncharacterized LOC107769801
cre-r.1	CHLRE_06g258200v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO:0006337 [list] [network] nucleosome disassembly	(6 genes)	IEA
GO:0045815 [list] [network] transcription initiation-coupled chromatin remodeling	(6 genes)	IEA
GO:0006334 [list] [network] nucleosome assembly	(85 genes)	IEA

GO CC

GO:0005634 [list] [network] nucleus

(8281 genes)

IEA

GO MF

GO:0042393 [list] [network] histone binding	(147 genes)	IEA
GO:0003682 [list] [network] chromatin binding	(441 genes)	IEA
GO:0016887 [list] [network] ATP hydrolysis activity	(1439 genes)	IEA
GO:0005524 [list] [network] ATP binding	(7858 genes)	IEA

Protein

XP_044340860.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, chlo 2, mito 2, cyto_nucl 2, chlo_mito 2, cysk_nucl 2, nucl_plas 2

(predict for XP_044340860.1)

Subcellular
localization
TargetP

other 6

(predict for XP_044340860.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123061712	tae-r.2 for 123070315	tae-r.2 for 123078771	hvu-r.1 for 123441817	bdi-r.1 for 100828996	osa-u.5 for 4326327	zma-u.5 for 103652548	sbi-r.1 for 8080826	ath-u.5 for AT3G15120	gma-u.5 for 100817519	gma-u.5 for 100803849	sly-u.5 for 101247940	bra-r.6 for 103859609	vvi-u.5 for 100243511	ppo-u.5 for 7470967	mtr-u.5 for 25487297	ghi-r.1 for 107917757	ghi-r.1 for 107939188	ghi-r.1 for 107919975	bna-r.1 for BNAC03G38920D	bna-r.1 for 106439398	sot-r.1 for 102599159	cit-r.1 for 102619535	nta-r.1 for 107793191	nta-r.1 for 107769801	cre-r.1 for CHLRE_06g258200v5

Ortholog

Ortholog ID: 9478

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

uncharacterized LOC123061712

uncharacterized LOC123070315

uncharacterized LOC123078771

uncharacterized LOC123441817

uncharacterized LOC100828996

uncharacterized LOC4326327

uncharacterized LOC103652548

uncharacterized LOC8080826

P-loop containing nucleoside triphosphate hydrolases superfamily protein

uncharacterized LOC100817519

uncharacterized LOC100803849

uncharacterized LOC101247940

uncharacterized LOC103859609

uncharacterized LOC100243511

uncharacterized LOC7470967

uncharacterized LOC25487297

uncharacterized LOC107917757

uncharacterized LOC107939188

uncharacterized LOC107919975

uncharacterized BNAC03G38920D

uncharacterized LOC106439398

uncharacterized LOC102599159

uncharacterized LOC102619535

uncharacterized LOC107793191

uncharacterized LOC107769801

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03020	RNA polymerase	2
tae03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03082	ATP-dependent chromatin remodeling	2
tae03020	RNA polymerase	2
tae03420	Nucleotide excision repair	2
tae03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	2
tae03020	RNA polymerase	2
tae03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03013	Nucleocytoplasmic transport	2
hvu03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	3
osa03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	4
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	4
ath03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	6
gma03020	RNA polymerase	2
gma03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03082	ATP-dependent chromatin remodeling	2
sly03040	Spliceosome	2
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	4
mtr00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00310	Lysine degradation	5
bna03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00310	Lysine degradation	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	4
cit03015	mRNA surveillance pathway	2
cit03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00310	Lysine degradation	2

Expression

Expression pattern

Entrez Gene ID^*

123061712

123070315

123078771

123441817

100828996

4326327

103652548

8080826

820743

100817519

100803849

101247940

103859609

100243511

7470967

25487297

107917757

107939188

107919975

106389189

106439398

102599159

102619535

107793191

107769801

5722086

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 123061712 (tae-r.2 coexpression data)

Top 50 enrichment test to 123061712 (tae-r.2 coexpression data)


Species	tae	hvu	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	3	1	1	1	1	1	1	2	1	1	1	1	1	3	2	1	1	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123061712 (tae-r.2 coexpression data)

Top 50 enrichment test to 123061712 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**