ATTED-II : GeneCoexpression result

Species	Gene	Description
cit-r.1	102619535	uncharacterized LOC102619535
ath-u.5	AT3G15120	P-loop containing nucleoside triphosphate hydrolases superfamily protein
bra-r.6	103859609	uncharacterized LOC103859609
ghi-r.1	107919975	uncharacterized LOC107919975
ghi-r.1	107939188	uncharacterized LOC107939188
ghi-r.1	107917757	uncharacterized LOC107917757
bna-r.1	BNAC03G38920D	uncharacterized BNAC03G38920D
bna-r.1	106439398	uncharacterized LOC106439398
gma-u.5	100817519	uncharacterized LOC100817519
gma-u.5	100803849	uncharacterized LOC100803849
vvi-u.5	100243511	uncharacterized LOC100243511
ppo-u.5	7470967	uncharacterized LOC7470967
mtr-u.5	25487297	uncharacterized LOC25487297
sly-u.5	101247940	uncharacterized LOC101247940
sot-r.1	102599159	uncharacterized LOC102599159
nta-r.1	107793191	uncharacterized LOC107793191
nta-r.1	107769801	uncharacterized LOC107769801
osa-u.5	4326327	uncharacterized LOC4326327
zma-u.5	103652548	uncharacterized LOC103652548
tae-r.2	123078771	uncharacterized LOC123078771
tae-r.2	123070315	uncharacterized LOC123070315
tae-r.2	123061712	uncharacterized LOC123061712
hvu-r.1	123441817	uncharacterized LOC123441817
sbi-r.1	8080826	uncharacterized LOC8080826
bdi-r.1	100828996	uncharacterized LOC100828996
cre-r.1	CHLRE_06g258200v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II

(107 genes)

IEA

GO CC

GO:0005634 [list] [network] nucleus

(2569 genes)

IEA

GO MF

GO:0042393 [list] [network] histone binding	(40 genes)	IEA
GO:0003682 [list] [network] chromatin binding	(116 genes)	IEA
GO:0016887 [list] [network] ATP hydrolysis activity	(454 genes)	IEA
GO:0005524 [list] [network] ATP binding	(1864 genes)	IEA

Protein

XP_052291584.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, mito 3

(predict for XP_052291584.1)

Subcellular
localization
TargetP

other 6, chlo 5

(predict for XP_052291584.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cit-r.1 for 102619535	ath-u.5 for AT3G15120	bra-r.6 for 103859609	ghi-r.1 for 107919975	ghi-r.1 for 107939188	ghi-r.1 for 107917757	bna-r.1 for BNAC03G38920D	bna-r.1 for 106439398	gma-u.5 for 100817519	gma-u.5 for 100803849	vvi-u.5 for 100243511	ppo-u.5 for 7470967	mtr-u.5 for 25487297	sly-u.5 for 101247940	sot-r.1 for 102599159	nta-r.1 for 107793191	nta-r.1 for 107769801	osa-u.5 for 4326327	zma-u.5 for 103652548	tae-r.2 for 123078771	tae-r.2 for 123070315	tae-r.2 for 123061712	hvu-r.1 for 123441817	sbi-r.1 for 8080826	bdi-r.1 for 100828996	cre-r.1 for CHLRE_06g258200v5

Ortholog

Ortholog ID: 9478

Species

cit

ath

bra

ghi

bna

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC102619535

P-loop containing nucleoside triphosphate hydrolases superfamily protein

uncharacterized LOC103859609

uncharacterized LOC107919975

uncharacterized LOC107939188

uncharacterized LOC107917757

uncharacterized BNAC03G38920D

uncharacterized LOC106439398

uncharacterized LOC100817519

uncharacterized LOC100803849

uncharacterized LOC100243511

uncharacterized LOC7470967

uncharacterized LOC25487297

uncharacterized LOC101247940

uncharacterized LOC102599159

uncharacterized LOC107793191

uncharacterized LOC107769801

uncharacterized LOC4326327

uncharacterized LOC103652548

uncharacterized LOC123078771

uncharacterized LOC123070315

uncharacterized LOC123061712

uncharacterized LOC123441817

uncharacterized LOC8080826

uncharacterized LOC100828996

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	4
cit03015	mRNA surveillance pathway	2
cit03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	4
ath03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00310	Lysine degradation	5
bna03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00310	Lysine degradation	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	6
gma03020	RNA polymerase	2
gma03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	4
mtr00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03082	ATP-dependent chromatin remodeling	2
sly03040	Spliceosome	2
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	3
osa03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	2
tae03020	RNA polymerase	2
tae03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03082	ATP-dependent chromatin remodeling	2
tae03020	RNA polymerase	2
tae03420	Nucleotide excision repair	2
tae03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03020	RNA polymerase	2
tae03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03013	Nucleocytoplasmic transport	2
hvu03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	4
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04120	Ubiquitin mediated proteolysis	2

Expression

Expression pattern

Entrez Gene ID^*

102619535

820743

103859609

107919975

107939188

107917757

106389189

106439398

100817519

100803849

100243511

7470967

25487297

101247940

102599159

107793191

107769801

4326327

103652548

123078771

123070315

123061712

123441817

8080826

100828996

5722086

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 102619535 (cit-r.1 coexpression data)

Top 50 enrichment test to 102619535 (cit-r.1 coexpression data)


Species	cit	ath	bra	ghi	bna	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	1	1	1	3	2	2	1	1	1	1	1	2	1	1	3	1	1	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 102619535 (cit-r.1 coexpression data)

Top 50 enrichment test to 102619535 (cit-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**