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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100247644   zinc finger CCCH domain-containing protein 18 
 vvi-r.5   100247644   zinc finger CCCH domain-containing protein 18 
 vvi-u.5   100243592   zinc finger CCCH domain-containing protein 18 
 ath-u.5   AT2G05160   CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein 
 gma-u.5   100818984   zinc finger CCCH domain-containing protein 18 
 gma-u.5   100810174   zinc finger CCCH domain-containing protein 18 
 ppo-u.5   7458259   zinc finger CCCH domain-containing protein 18 
 ppo-u.5   7456000   zinc finger CCCH domain-containing protein 18 
 mtr-u.5   11419540   zinc finger CCCH domain-containing protein 18 
 mtr-u.5   11442304   zinc finger CCCH domain-containing protein 18 
 sly-u.5   101252701   zinc finger CCCH domain-containing protein 18 
 sly-u.5   101253006   zinc finger CCCH domain-containing protein 18 
 osa-u.5   4344566   zinc finger CCCH domain-containing protein 54-like 
 zma-u.5   100272340   uncharacterized LOC100272340 

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Top 50 coexpressed genes to 100247644 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100247644 (vvi-u.5 coexpression data)

CoexMap"100247644"


vviLOC100247644 | Entrez gene ID : 100247644      
Species vvi ath gma ppo mtr sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 3 1 2 2 2 2 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (2138 genes)  IEA  
Protein XP_010657431.3 [sequence] [blastp]
XP_010657433.3 [sequence] [blastp]
XP_010657434.1 [sequence] [blastp]
XP_019079356.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  chlo 1,  extr 1,  vacu 1  (predict for XP_010657431.3)
nucl 8,  chlo 1,  extr 1,  vacu 1  (predict for XP_010657433.3)
nucl 8,  chlo 1,  cyto 1,  vacu 1  (predict for XP_010657434.1)
nucl 4,  chlo 3,  mito 3,  chlo_mito 3  (predict for XP_019079356.1)
Subcellular
localization
TargetP
other 9  (predict for XP_010657431.3)
other 9  (predict for XP_010657433.3)
other 9  (predict for XP_010657434.1)
chlo 7  (predict for XP_019079356.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100247644

.
vvi-r.5
for
100247644

.
vvi-u.5
for
100243592

.
ath-u.5
for
AT2G05160

.
gma-u.5
for
100818984

.
gma-u.5
for
100810174

.
ppo-u.5
for
7458259

.
ppo-u.5
for
7456000

.
mtr-u.5
for
11419540

.
mtr-u.5
for
11442304

.
sly-u.5
for
101252701

.
sly-u.5
for
101253006

.
osa-u.5
for
4344566

.
zma-u.5
for
100272340

.


Ortholog ID: 4511
Species ath gma gma sly sly osa zma vvi vvi ppo ppo mtr mtr ghi ghi bna bna sbi sot sot cit cit nta nta
Symbol AT2G05160 LOC100818984 LOC100806206 LOC101252701 LOC101253006 LOC4344566 LOC100272340 LOC100247644 LOC100243592 LOC7456000 LOC7458259 LOC11442304 LOC11419540 LOC107922699 LOC107917893 LOC111204629 LOC106426726 LOC110431810 LOC102595733 LOC102595521 LOC102620264 LOC102608090 LOC107797045 LOC107809356
Function* CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 54-like uncharacterized LOC100272340 zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18-like zinc finger CCCH domain-containing protein 18-like zinc finger CCCH domain-containing protein 54-like zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18-like zinc finger CCCH domain-containing protein 18-like zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18-like zinc finger CCCH domain-containing protein 18
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 3
ath00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00910 Nitrogen metabolism 4
gma01310 Nitrogen cycle 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00010 Glycolysis / Gluconeogenesis 2
sly00020 Citrate cycle (TCA cycle) 2
sly00620 Pyruvate metabolism 2
sly00710 Carbon fixation by Calvin cycle 2
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 4
zma00710 Carbon fixation by Calvin cycle 3
zma00195 Photosynthesis 2
zma00010 Glycolysis / Gluconeogenesis 2
zma00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00906 Carotenoid biosynthesis 2
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00460 Cyanoamino acid metabolism 2
vvi00630 Glyoxylate and dicarboxylate metabolism 2
vvi00910 Nitrogen metabolism 2
vvi01200 Carbon metabolism 2
vvi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
mtr00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
sot04141 Protein processing in endoplasmic reticulum 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 9
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 815064 100818984 100806206 101252701 101253006 4344566 100272340 100247644 100243592 7456000 7458259 11442304 11419540 107922699 107917893 111204629 106426726 110431810 102595733 102595521 102620264 102608090 107797045 107809356
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