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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100272340   uncharacterized LOC100272340 
 zma-r.6   100272340   uncharacterized LOC100272340 
 sbi-r.1   110431810   zinc finger CCCH domain-containing protein 54-like 
 osa-u.5   4344566   zinc finger CCCH domain-containing protein 54-like 
 ath-u.5   AT2G05160   CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein 
 gma-u.5   100818984   zinc finger CCCH domain-containing protein 18 
 gma-u.5   100806206   zinc finger CCCH domain-containing protein 18 
 sly-u.5   101253006   zinc finger CCCH domain-containing protein 18 
 sly-u.5   101252701   zinc finger CCCH domain-containing protein 18 
 vvi-u.5   100247644   zinc finger CCCH domain-containing protein 18 
 vvi-u.5   100243592   zinc finger CCCH domain-containing protein 18 
 ppo-u.5   7456000   zinc finger CCCH domain-containing protein 18 
 ppo-u.5   7458259   zinc finger CCCH domain-containing protein 18 
 mtr-u.5   11419540   zinc finger CCCH domain-containing protein 18 
 mtr-u.5   11442304   zinc finger CCCH domain-containing protein 18 
 ghi-r.1   107912599   zinc finger CCCH domain-containing protein 18 
 ghi-r.1   107917893   zinc finger CCCH domain-containing protein 18 
 ghi-r.1   107922419   zinc finger CCCH domain-containing protein 18 
 bna-r.1   111204629   zinc finger CCCH domain-containing protein 18-like 
 bna-r.1   125590208   zinc finger CCCH domain-containing protein 18-like 
 bna-r.1   106444236   zinc finger CCCH domain-containing protein 18 
 sot-r.1   102595521   zinc finger CCCH domain-containing protein 18-like 
 sot-r.1   102595733   zinc finger CCCH domain-containing protein 18 
 cit-r.1   102620264   zinc finger CCCH domain-containing protein 18-like 
 cit-r.1   102608090   zinc finger CCCH domain-containing protein 18 
 nta-r.1   107809356   zinc finger CCCH domain-containing protein 18 
 nta-r.1   107789997   zinc finger CCCH domain-containing protein 18 
 nta-r.1   107797045   zinc finger CCCH domain-containing protein 18-like 

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Top 50 coexpressed genes to 100272340 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100272340 (zma-u.5 coexpression data)

CoexMap"100272340"


zmaLOC100272340 | Entrez gene ID : 100272340      
Species zma sbi osa ath gma sly vvi ppo mtr ghi bna sot cit nta bra cre tae hvu bdi
Paralog 2 1 1 1 2 2 2 2 2 3 3 2 2 3 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1549 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (2153 genes)  IEA  
Protein NP_001140295.1 [sequence] [blastp]
XP_008658220.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 4,  cyto_nucl 4  (predict for NP_001140295.1)
nucl 5,  cyto 4,  vacu 1,  cysk 1  (predict for XP_008658220.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001140295.1)
other 8  (predict for XP_008658220.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100272340
zma-r.6
for
100272340
sbi-r.1
for
110431810
osa-u.5
for
4344566
ath-u.5
for
AT2G05160
gma-u.5
for
100818984
gma-u.5
for
100806206
sly-u.5
for
101253006
sly-u.5
for
101252701
vvi-u.5
for
100247644
vvi-u.5
for
100243592
ppo-u.5
for
7456000
ppo-u.5
for
7458259
mtr-u.5
for
11419540
mtr-u.5
for
11442304
ghi-r.1
for
107912599
ghi-r.1
for
107917893
ghi-r.1
for
107922419
bna-r.1
for
111204629
bna-r.1
for
125590208
bna-r.1
for
106444236
sot-r.1
for
102595521
sot-r.1
for
102595733
cit-r.1
for
102620264
cit-r.1
for
102608090
nta-r.1
for
107809356
nta-r.1
for
107789997
nta-r.1
for
107797045


Ortholog ID: 4511
Species zma sbi osa ath gma gma sly sly vvi vvi ppo ppo mtr mtr ghi ghi bna bna bna sot sot cit cit nta nta nta
Symbol LOC100272340 LOC110431810 LOC4344566 AT2G05160 LOC100818984 LOC100806206 LOC101253006 LOC101252701 LOC100247644 LOC100243592 LOC7456000 LOC7458259 LOC11419540 LOC11442304 LOC107917893 LOC107922699 LOC111204629 LOC125590208 LOC106426726 LOC102595521 LOC102595733 LOC102620264 LOC102608090 LOC107809356 LOC107797045 LOC107807310
Function* uncharacterized LOC100272340 zinc finger CCCH domain-containing protein 54-like zinc finger CCCH domain-containing protein 54-like CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18-like zinc finger CCCH domain-containing protein 18-like zinc finger CCCH domain-containing protein 18-like zinc finger CCCH domain-containing protein 18-like zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18-like zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18-like zinc finger CCCH domain-containing protein 18
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 4
zma00710 Carbon fixation by Calvin cycle 3
zma00195 Photosynthesis 2
zma00010 Glycolysis / Gluconeogenesis 2
zma00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 3
ath00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00910 Nitrogen metabolism 4
gma01310 Nitrogen cycle 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00010 Glycolysis / Gluconeogenesis 2
sly00020 Citrate cycle (TCA cycle) 2
sly00620 Pyruvate metabolism 2
sly00710 Carbon fixation by Calvin cycle 2
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00906 Carotenoid biosynthesis 2
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00460 Cyanoamino acid metabolism 2
vvi00630 Glyoxylate and dicarboxylate metabolism 2
vvi00910 Nitrogen metabolism 2
vvi01200 Carbon metabolism 2
vvi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
mtr00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
sot04141 Protein processing in endoplasmic reticulum 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 9
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100272340 110431810 4344566 815064 100818984 100806206 101253006 101252701 100247644 100243592 7456000 7458259 11419540 11442304 107917893 107922699 111204629 125590208 106426726 102595521 102595733 102620264 102608090 107809356 107797045 107807310
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