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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102620264   zinc finger CCCH domain-containing protein 18-like 
 cit-r.1   102608090   zinc finger CCCH domain-containing protein 18 
 ath-u.5   AT2G05160   CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein 
 ghi-r.1   107912599   zinc finger CCCH domain-containing protein 18 
 ghi-r.1   107917893   zinc finger CCCH domain-containing protein 18 
 ghi-r.1   107922419   zinc finger CCCH domain-containing protein 18 
 bna-r.1   111204629   zinc finger CCCH domain-containing protein 18-like 
 bna-r.1   106426726   zinc finger CCCH domain-containing protein 18-like 
 bna-r.1   125590208   zinc finger CCCH domain-containing protein 18-like 
 gma-u.5   100810174   zinc finger CCCH domain-containing protein 18 
 gma-u.5   100818984   zinc finger CCCH domain-containing protein 18 
 gma-u.5   100806206   zinc finger CCCH domain-containing protein 18 
 vvi-u.5   100247644   zinc finger CCCH domain-containing protein 18 
 vvi-u.5   100243592   zinc finger CCCH domain-containing protein 18 
 ppo-u.5   7458259   zinc finger CCCH domain-containing protein 18 
 ppo-u.5   7456000   zinc finger CCCH domain-containing protein 18 
 mtr-u.5   11419540   zinc finger CCCH domain-containing protein 18 
 mtr-u.5   11442304   zinc finger CCCH domain-containing protein 18 
 sly-u.5   101252701   zinc finger CCCH domain-containing protein 18 
 sly-u.5   101253006   zinc finger CCCH domain-containing protein 18 
 sot-r.1   102595521   zinc finger CCCH domain-containing protein 18-like 
 sot-r.1   102595733   zinc finger CCCH domain-containing protein 18 
 nta-r.1   107809356   zinc finger CCCH domain-containing protein 18 
 nta-r.1   107789997   zinc finger CCCH domain-containing protein 18 
 nta-r.1   107797045   zinc finger CCCH domain-containing protein 18-like 
 osa-u.5   4344566   zinc finger CCCH domain-containing protein 54-like 
 zma-u.5   100272340   uncharacterized LOC100272340 
 sbi-r.1   110431810   zinc finger CCCH domain-containing protein 54-like 

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Top 50 coexpressed genes to 102620264 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102620264 (cit-r.1 coexpression data)

CoexMap"102620264"


citLOC102620264 | Entrez gene ID : 102620264    
Species cit ath ghi bna gma vvi ppo mtr sly sot nta osa zma sbi bdi bra tae hvu cre
Paralog 2 1 3 3 3 2 2 2 2 2 3 1 1 1 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1117 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (1833 genes)  IEA  
Protein XP_006474936.1 [sequence] [blastp]
XP_006474937.1 [sequence] [blastp]
XP_015384703.1 [sequence] [blastp]
XP_015384705.1 [sequence] [blastp]
XP_015384706.1 [sequence] [blastp]
XP_052289749.1 [sequence] [blastp]
XP_052289751.1 [sequence] [blastp]
XP_052289752.1 [sequence] [blastp]
XP_052289753.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 2,  mito 1,  vacu 1,  cysk 1  (predict for XP_006474936.1)
nucl 6,  cyto 2,  mito 1,  vacu 1,  cysk 1  (predict for XP_006474937.1)
nucl 6,  cyto 2,  mito 1,  vacu 1,  cysk 1  (predict for XP_015384703.1)
nucl 6,  cyto 2,  mito 1,  vacu 1,  cysk 1  (predict for XP_015384705.1)
nucl 6,  cyto 2,  mito 1,  vacu 1,  cysk 1  (predict for XP_015384706.1)
nucl 6,  cyto 2,  mito 1,  vacu 1,  cysk 1  (predict for XP_052289749.1)
nucl 6,  cyto 2,  mito 1,  vacu 1,  cysk 1  (predict for XP_052289751.1)
nucl 6,  cyto 2,  mito 1,  vacu 1,  cysk 1  (predict for XP_052289752.1)
nucl 6,  cyto 2,  mito 1,  vacu 1,  cysk 1  (predict for XP_052289753.1)
Subcellular
localization
TargetP
other 9  (predict for XP_006474936.1)
other 9  (predict for XP_006474937.1)
other 9  (predict for XP_015384703.1)
other 9  (predict for XP_015384705.1)
other 9  (predict for XP_015384706.1)
other 9  (predict for XP_052289749.1)
other 9  (predict for XP_052289751.1)
other 9  (predict for XP_052289752.1)
other 9  (predict for XP_052289753.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102620264
cit-r.1
for
102608090
ath-u.5
for
AT2G05160
ghi-r.1
for
107912599
ghi-r.1
for
107917893
ghi-r.1
for
107922419
bna-r.1
for
111204629
bna-r.1
for
106426726
bna-r.1
for
125590208
gma-u.5
for
100810174
gma-u.5
for
100818984
gma-u.5
for
100806206
vvi-u.5
for
100247644
vvi-u.5
for
100243592
ppo-u.5
for
7458259
ppo-u.5
for
7456000
mtr-u.5
for
11419540
mtr-u.5
for
11442304
sly-u.5
for
101252701
sly-u.5
for
101253006
sot-r.1
for
102595521
sot-r.1
for
102595733
nta-r.1
for
107809356
nta-r.1
for
107789997
nta-r.1
for
107797045
osa-u.5
for
4344566
zma-u.5
for
100272340
sbi-r.1
for
110431810


Ortholog ID: 4511
Species cit cit ath ghi ghi bna bna bna gma gma vvi vvi ppo ppo mtr mtr sly sly sot sot nta nta nta osa zma sbi
Symbol LOC102620264 LOC102608090 AT2G05160 LOC107917893 LOC107922699 LOC111204629 LOC106426726 LOC125590208 LOC100818984 LOC100806206 LOC100247644 LOC100243592 LOC7458259 LOC7456000 LOC11419540 LOC11442304 LOC101252701 LOC101253006 LOC102595521 LOC102595733 LOC107809356 LOC107797045 LOC107807310 LOC4344566 LOC100272340 LOC110431810
Function* zinc finger CCCH domain-containing protein 18-like zinc finger CCCH domain-containing protein 18 CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18-like zinc finger CCCH domain-containing protein 18-like zinc finger CCCH domain-containing protein 18-like zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18-like zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18-like zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 54-like uncharacterized LOC100272340 zinc finger CCCH domain-containing protein 54-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 3
ath00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00910 Nitrogen metabolism 4
gma01310 Nitrogen cycle 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00906 Carotenoid biosynthesis 2
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00460 Cyanoamino acid metabolism 2
vvi00630 Glyoxylate and dicarboxylate metabolism 2
vvi00910 Nitrogen metabolism 2
vvi01200 Carbon metabolism 2
vvi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
mtr00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00010 Glycolysis / Gluconeogenesis 2
sly00020 Citrate cycle (TCA cycle) 2
sly00620 Pyruvate metabolism 2
sly00710 Carbon fixation by Calvin cycle 2
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
sot04141 Protein processing in endoplasmic reticulum 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 9
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 4
zma00710 Carbon fixation by Calvin cycle 3
zma00195 Photosynthesis 2
zma00010 Glycolysis / Gluconeogenesis 2
zma00020 Citrate cycle (TCA cycle) 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102620264 102608090 815064 107917893 107922699 111204629 106426726 125590208 100818984 100806206 100247644 100243592 7458259 7456000 11419540 11442304 101252701 101253006 102595521 102595733 107809356 107797045 107807310 4344566 100272340 110431810
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