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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11442304   zinc finger CCCH domain-containing protein 18 
 mtr-r.5   11442304   zinc finger CCCH domain-containing protein 18 
 mtr-m.5   11442304   zinc finger CCCH domain-containing protein 18 
 mtr-u.5   11419540   zinc finger CCCH domain-containing protein 18 
 gma-u.5   100818984   zinc finger CCCH domain-containing protein 18 
 gma-u.5   100810174   zinc finger CCCH domain-containing protein 18 
 ppo-u.5   7458259   zinc finger CCCH domain-containing protein 18 
 ppo-u.5   7456000   zinc finger CCCH domain-containing protein 18 
 ath-u.5   AT2G05160   CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein 
 vvi-u.5   100247644   zinc finger CCCH domain-containing protein 18 
 vvi-u.5   100243592   zinc finger CCCH domain-containing protein 18 
 sly-u.5   101252701   zinc finger CCCH domain-containing protein 18 
 sly-u.5   101253006   zinc finger CCCH domain-containing protein 18 
 osa-u.5   4344566   zinc finger CCCH domain-containing protein 54-like 
 zma-u.5   100272340   uncharacterized LOC100272340 

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Top 50 coexpressed genes to 11442304 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11442304 (mtr-u.5 coexpression data)

CoexMap"11442304"


mtrLOC11442304 | Entrez gene ID : 11442304      
Species mtr gma ppo ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 4 2 2 1 2 2 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1400 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (2334 genes)  IEA  
Protein XP_003617718.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  pero 1,  chlo 1,  vacu 1,  cyto_pero 1  (predict for XP_003617718.2)
Subcellular
localization
TargetP
other 9  (predict for XP_003617718.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11442304
mtr-r.5
for
11442304
mtr-m.5
for
11442304
mtr-u.5
for
11419540
gma-u.5
for
100818984
gma-u.5
for
100810174
ppo-u.5
for
7458259
ppo-u.5
for
7456000
ath-u.5
for
AT2G05160
vvi-u.5
for
100247644
vvi-u.5
for
100243592
sly-u.5
for
101252701
sly-u.5
for
101253006
osa-u.5
for
4344566
zma-u.5
for
100272340


Ortholog ID: 4511
Species mtr mtr gma gma ppo ppo ath vvi vvi ghi ghi bna bna cit cit sly sly sot sot nta nta osa zma sbi
Symbol LOC11442304 LOC11419540 LOC100818984 LOC100806206 LOC7456000 LOC7458259 AT2G05160 LOC100247644 LOC100243592 LOC107922699 LOC107917893 LOC111204629 LOC106426726 LOC102620264 LOC102608090 LOC101252701 LOC101253006 LOC102595733 LOC102595521 LOC107797045 LOC107809356 LOC4344566 LOC100272340 LOC110431810
Function* zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18 CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18-like zinc finger CCCH domain-containing protein 18-like zinc finger CCCH domain-containing protein 18-like zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 18-like zinc finger CCCH domain-containing protein 18-like zinc finger CCCH domain-containing protein 18 zinc finger CCCH domain-containing protein 54-like uncharacterized LOC100272340 zinc finger CCCH domain-containing protein 54-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
mtr00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00910 Nitrogen metabolism 4
gma01310 Nitrogen cycle 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 3
ath00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00906 Carotenoid biosynthesis 2
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00460 Cyanoamino acid metabolism 2
vvi00630 Glyoxylate and dicarboxylate metabolism 2
vvi00910 Nitrogen metabolism 2
vvi01200 Carbon metabolism 2
vvi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00010 Glycolysis / Gluconeogenesis 2
sly00020 Citrate cycle (TCA cycle) 2
sly00620 Pyruvate metabolism 2
sly00710 Carbon fixation by Calvin cycle 2
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
sot04141 Protein processing in endoplasmic reticulum 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 9
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 4
zma00710 Carbon fixation by Calvin cycle 3
zma00195 Photosynthesis 2
zma00010 Glycolysis / Gluconeogenesis 2
zma00020 Citrate cycle (TCA cycle) 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11442304 11419540 100818984 100806206 7456000 7458259 815064 100247644 100243592 107922699 107917893 111204629 106426726 102620264 102608090 101252701 101253006 102595733 102595521 107797045 107809356 4344566 100272340 110431810
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