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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100250699   la protein 1 
 vvi-r.5   100250699   la protein 1 
 vvi-m.5   100250699   la protein 1 
 vvi-u.5   104879005   la protein 1 
 ath-u.5   La1   La protein 1 
 ath-u.5   La2   RNA recognition motif (RRM)-containing protein 
 gma-u.5   100803099   la protein 1 
 gma-u.5   100786016   la protein 1 
 ppo-u.5   7495710   la protein 1 
 ppo-u.5   7462941   la protein 1 
 mtr-u.5   25482256   la protein 1 
 sly-u.5   101259467   la protein 1 
 osa-u.5   4329949   la protein 1 
 osa-u.5   4336287   la protein 1 
 zma-u.5   103627401   la protein 1 
 zma-u.5   100194092   uncharacterized LOC100194092 

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Top 50 coexpressed genes to 100250699 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100250699 (vvi-u.5 coexpression data)

CoexMap"100250699"


vviLOC100250699 | Entrez gene ID : 100250699      
Species vvi ath gma ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 4 2 2 2 1 1 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006396 [list] [network] RNA processing  (548 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2597 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (233 genes)  IEA  
Protein XP_002284157.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 3,  cysk_nucl 3,  nucl_plas 3  (predict for XP_002284157.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002284157.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100250699
vvi-r.5
for
100250699
vvi-m.5
for
100250699
vvi-u.5
for
104879005
ath-u.5
for
La1
ath-u.5
for
La2
gma-u.5
for
100803099
gma-u.5
for
100786016
ppo-u.5
for
7495710
ppo-u.5
for
7462941
mtr-u.5
for
25482256
sly-u.5
for
101259467
osa-u.5
for
4329949
osa-u.5
for
4336287
zma-u.5
for
103627401
zma-u.5
for
100194092


Ortholog ID: 3832
Species vvi vvi ath ath gma gma bra bra ppo ppo mtr ghi ghi bna bna cit cit sly sot nta nta osa osa zma zma tae tae hvu sbi sbi bdi cre cre
Symbol LOC100250699 LOC104879005 La2 La1 LOC100803099 LOC100786016 LOC103850538 LOC103830406 LOC7462941 LOC7495710 LOC25482256 LOC107898436 LOC107900508 LOC106361126 LOC125576500 LOC102610478 LOC102622153 LOC101259467 LOC102588675 LOC107783974 LOC107773773 LOC4336287 LOC4329949 LOC100194092 LOC103627401 LOC123045906 LOC123189647 LOC123427127 LOC8059667 LOC8060205 LOC100820966 CHLRE_17g724200v5 CHLRE_02g146200v5
Function* la protein 1 la protein 1 RNA recognition motif (RRM)-containing protein La protein 1 la protein 1 la protein 1 la protein 1 la protein 2 la protein 1 la protein 1 la protein 1 la protein 1-like la protein 1 la protein 1-like la protein 1-like la protein 1-like la protein 1 la protein 1 la protein 1 la protein 1 la protein 1 la protein 1 la protein 1 uncharacterized LOC100194092 la protein 1 la protein 1 la protein 1 la protein 1-like la protein 1 la protein 1 la protein 1 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 5
bra03013 Nucleocytoplasmic transport 4
bra03010 Ribosome 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 6
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 4
cit04712 Circadian rhythm - plant 3
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
nta03013 Nucleocytoplasmic transport 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
nta03013 Nucleocytoplasmic transport 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 2
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 2
zma00970 Aminoacyl-tRNA biosynthesis 2
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 9
tae03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 5
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03018 RNA degradation 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100250699 104879005 844327 829408 100803099 100786016 103850538 103830406 7462941 7495710 25482256 107898436 107900508 106361126 125576500 102610478 102622153 101259467 102588675 107783974 107773773 4336287 4329949 100194092 103627401 123045906 123189647 123427127 8059667 8060205 100820966 5722749 5720519
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