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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   125576500   la protein 1-like 
 bna-r.1   106353344   la protein 2 
 bna-r.1   106441077   la protein 1-like 
 bna-r.1   106436683   la protein 1 
 bra-r.6   103833293   la protein 1-like 
 bra-r.6   103834519   la protein 1 
 bra-r.6   103850538   la protein 1 
 ath-u.5   La1   La protein 1 
 ath-u.5   La2   RNA recognition motif (RRM)-containing protein 
 ghi-r.1   107900508   la protein 1 
 ghi-r.1   107898436   la protein 1-like 
 ghi-r.1   107906952   la protein 1 
 cit-r.1   102610478   la protein 1-like 
 cit-r.1   102622153   la protein 1 
 gma-u.5   100803099   la protein 1 
 gma-u.5   100786016   la protein 1 
 vvi-u.5   100250699   la protein 1 
 vvi-u.5   104879005   la protein 1 
 ppo-u.5   7495710   la protein 1 
 ppo-u.5   7462941   la protein 1 
 mtr-u.5   25482256   la protein 1 
 sly-u.5   101259467   la protein 1 
 sot-r.1   102588675   la protein 1 
 nta-r.1   107783974   la protein 1 
 nta-r.1   107773773   la protein 1 
 osa-u.5   4336287   la protein 1 
 osa-u.5   4329949   la protein 1 
 zma-u.5   103627401   la protein 1 
 zma-u.5   100194092   uncharacterized LOC100194092 
 tae-r.2   123045906   la protein 1 
 tae-r.2   123053775   la protein 1 
 tae-r.2   123189647   la protein 1 
 hvu-r.1   123427127   la protein 1-like 
 sbi-r.1   8059667   la protein 1 
 sbi-r.1   8060205   la protein 1 
 bdi-r.1   100820966   la protein 1 
 cre-r.1   CHLRE_02g146200v5   uncharacterized protein 
 cre-r.1   CHLRE_17g724200v5   uncharacterized protein 

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Top 50 coexpressed genes to 125576500 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 125576500 (bna-r.1 coexpression data)

CoexMap"125576500"


bnaLOC125576500 | Entrez gene ID : 125576500    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 2 3 2 2 2 2 1 1 1 2 2 2 3 1 2 1 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (918 genes)  IEA  
Protein XP_048592675.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  chlo 1,  cyto 1  (predict for XP_048592675.1)
Subcellular
localization
TargetP
mito 8,  other 3  (predict for XP_048592675.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
125576500
bna-r.1
for
106353344
bna-r.1
for
106441077
bna-r.1
for
106436683
bra-r.6
for
103833293
bra-r.6
for
103834519
bra-r.6
for
103850538
ath-u.5
for
La1
ath-u.5
for
La2
ghi-r.1
for
107900508
ghi-r.1
for
107898436
ghi-r.1
for
107906952
cit-r.1
for
102610478
cit-r.1
for
102622153
gma-u.5
for
100803099
gma-u.5
for
100786016
vvi-u.5
for
100250699
vvi-u.5
for
104879005
ppo-u.5
for
7495710
ppo-u.5
for
7462941
mtr-u.5
for
25482256
sly-u.5
for
101259467
sot-r.1
for
102588675
nta-r.1
for
107783974
nta-r.1
for
107773773
osa-u.5
for
4336287
osa-u.5
for
4329949
zma-u.5
for
103627401
zma-u.5
for
100194092
tae-r.2
for
123045906
tae-r.2
for
123053775
tae-r.2
for
123189647
hvu-r.1
for
123427127
sbi-r.1
for
8059667
sbi-r.1
for
8060205
bdi-r.1
for
100820966
cre-r.1
for
CHLRE_02g146200v5
cre-r.1
for
CHLRE_17g724200v5


Ortholog ID: 3832
Species bna bna bna bra bra bra ath ath ghi ghi ghi cit cit gma gma vvi vvi ppo ppo mtr sly sot nta nta osa osa zma zma tae tae tae hvu sbi sbi bdi cre cre
Symbol LOC125576500 LOC106436683 LOC106361126 LOC103834519 LOC103850538 LOC103830406 La1 La2 LOC107900508 LOC107898436 LOC107906952 LOC102610478 LOC102622153 LOC100803099 LOC100786016 LOC100250699 LOC104879005 LOC7495710 LOC7462941 LOC25482256 LOC101259467 LOC102588675 LOC107783974 LOC107773773 LOC4336287 LOC4329949 LOC103627401 LOC100194092 LOC123045906 LOC123053775 LOC123189647 LOC123427127 LOC8059667 LOC8060205 LOC100820966 CHLRE_02g146200v5 CHLRE_17g724200v5
Function* la protein 1-like la protein 1 la protein 1-like la protein 1 la protein 1 la protein 2 La protein 1 RNA recognition motif (RRM)-containing protein la protein 1 la protein 1-like la protein 1 la protein 1-like la protein 1 la protein 1 la protein 1 la protein 1 la protein 1 la protein 1 la protein 1 la protein 1 la protein 1 la protein 1 la protein 1 la protein 1 la protein 1 la protein 1 la protein 1 uncharacterized LOC100194092 la protein 1 la protein 1 la protein 1 la protein 1-like la protein 1 la protein 1 la protein 1 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 5
bra03013 Nucleocytoplasmic transport 4
bra03010 Ribosome 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 4
cit04712 Circadian rhythm - plant 3
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 6
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
nta03013 Nucleocytoplasmic transport 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
nta03013 Nucleocytoplasmic transport 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 2
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 2
zma00970 Aminoacyl-tRNA biosynthesis 2
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 9
tae03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 5
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 125576500 106436683 106361126 103834519 103850538 103830406 829408 844327 107900508 107898436 107906952 102610478 102622153 100803099 100786016 100250699 104879005 7495710 7462941 25482256 101259467 102588675 107783974 107773773 4336287 4329949 103627401 100194092 123045906 123053775 123189647 123427127 8059667 8060205 100820966 5720519 5722749
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