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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_02g146200v5   uncharacterized protein 
 ath-u.5   La1   La protein 1 
 ath-u.5   La2   RNA recognition motif (RRM)-containing protein 
 gma-u.5   100803099   la protein 1 
 gma-u.5   100786016   la protein 1 
 sly-u.5   101259467   la protein 1 
 osa-u.5   4329949   la protein 1 
 osa-u.5   4336287   la protein 1 
 zma-u.5   100194092   uncharacterized LOC100194092 
 zma-u.5   103627401   la protein 1 
 vvi-u.5   104879005   la protein 1 
 vvi-u.5   100250699   la protein 1 
 ppo-u.5   7495710   la protein 1 
 ppo-u.5   7462941   la protein 1 
 mtr-u.5   25482256   la protein 1 

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Top 50 coexpressed genes to CHLRE_02g146200v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_02g146200v5 (cre-r.1 coexpression data)

CoexMap"5720519"


creCHLRE_02g146200v5 | Entrez gene ID : 5720519    
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 2 2 1 2 2 2 2 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (670 genes)  IEA  
Protein XP_042927715.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  mito 1,  plas 1,  mito_plas 1  (predict for XP_042927715.1)
Subcellular
localization
TargetP
other 9  (predict for XP_042927715.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_02g146200v5

.
ath-u.5
for
La1

.
ath-u.5
for
La2

.
gma-u.5
for
100803099

.
gma-u.5
for
100786016

.
sly-u.5
for
101259467

.
osa-u.5
for
4329949

.
osa-u.5
for
4336287

.
zma-u.5
for
100194092

.
zma-u.5
for
103627401

.
vvi-u.5
for
104879005

.
vvi-u.5
for
100250699

.
ppo-u.5
for
7495710

.
ppo-u.5
for
7462941

.
mtr-u.5
for
25482256

.


Ortholog ID: 3832
Species ath ath gma gma sly osa osa zma zma bra bra vvi vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre cre sbi sbi sot cit cit bdi nta nta
Symbol La2 La1 LOC100803099 LOC100786016 LOC101259467 LOC4336287 LOC4329949 LOC100194092 LOC103627401 LOC103850538 LOC103830406 LOC100250699 LOC104879005 LOC7462941 LOC7495710 LOC25482256 LOC123045906 LOC123189647 LOC123427127 LOC107898436 LOC107900508 LOC106361126 LOC125576500 CHLRE_17g724200v5 CHLRE_02g146200v5 LOC8059667 LOC8060205 LOC102588675 LOC102610478 LOC102622153 LOC100820966 LOC107783974 LOC107773773
Function* RNA recognition motif (RRM)-containing protein La protein 1 la protein 1 la protein 1 la protein 1 la protein 1 la protein 1 uncharacterized LOC100194092 la protein 1 la protein 1 la protein 2 la protein 1 la protein 1 la protein 1 la protein 1 la protein 1 la protein 1 la protein 1 la protein 1-like la protein 1-like la protein 1 la protein 1-like la protein 1-like uncharacterized protein uncharacterized protein la protein 1 la protein 1 la protein 1 la protein 1-like la protein 1 la protein 1 la protein 1 la protein 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 2
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 2
zma00970 Aminoacyl-tRNA biosynthesis 2
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 5
bra03013 Nucleocytoplasmic transport 4
bra03010 Ribosome 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 6
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 9
tae03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 5
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 4
cit04712 Circadian rhythm - plant 3
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
nta03013 Nucleocytoplasmic transport 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
nta03013 Nucleocytoplasmic transport 2
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844327 829408 100803099 100786016 101259467 4336287 4329949 100194092 103627401 103850538 103830406 100250699 104879005 7462941 7495710 25482256 123045906 123189647 123427127 107898436 107900508 106361126 125576500 5722749 5720519 8059667 8060205 102588675 102610478 102622153 100820966 107783974 107773773
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