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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123045906   la protein 1 
 tae-r.2   123189647   la protein 1 
 tae-r.2   123053775   la protein 1 
 hvu-r.1   123427127   la protein 1-like 
 bdi-r.1   100820966   la protein 1 
 osa-u.5   4329949   la protein 1 
 osa-u.5   4336287   la protein 1 
 zma-u.5   103627401   la protein 1 
 zma-u.5   100194092   uncharacterized LOC100194092 
 sbi-r.1   8059667   la protein 1 
 sbi-r.1   8060205   la protein 1 
 ath-u.5   La1   La protein 1 
 ath-u.5   La2   RNA recognition motif (RRM)-containing protein 
 gma-u.5   100803099   la protein 1 
 gma-u.5   100786016   la protein 1 
 sly-u.5   101259467   la protein 1 
 bra-r.6   103833293   la protein 1-like 
 bra-r.6   103830406   la protein 2 
 bra-r.6   103834519   la protein 1 
 vvi-u.5   104879005   la protein 1 
 vvi-u.5   100250699   la protein 1 
 ppo-u.5   7495710   la protein 1 
 ppo-u.5   7462941   la protein 1 
 mtr-u.5   25482256   la protein 1 
 ghi-r.1   107906952   la protein 1 
 ghi-r.1   107898436   la protein 1-like 
 ghi-r.1   107900508   la protein 1 
 bna-r.1   106436683   la protein 1 
 bna-r.1   106441077   la protein 1-like 
 bna-r.1   125576500   la protein 1-like 
 sot-r.1   102588675   la protein 1 
 cit-r.1   102610478   la protein 1-like 
 cit-r.1   102622153   la protein 1 
 nta-r.1   107783974   la protein 1 
 nta-r.1   107773773   la protein 1 
 cre-r.1   CHLRE_02g146200v5   uncharacterized protein 
 cre-r.1   CHLRE_17g724200v5   uncharacterized protein 

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Top 50 coexpressed genes to 123045906 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123045906 (tae-r.2 coexpression data)

CoexMap"123045906"


taeLOC123045906 | Entrez gene ID : 123045906    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 2 2 2 2 2 1 3 2 2 1 3 3 1 2 2 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006396 [list] [network] RNA processing  (1836 genes)  IEA  
GO CC
GO:1990904 [list] [network] ribonucleoprotein complex  (1478 genes)  IEA  
GO:0005634 [list] [network] nucleus  (8281 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (862 genes)  IEA  
Protein XP_044325083.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  pero 3,  cyto 2,  chlo_mito 2  (predict for XP_044325083.1)
Subcellular
localization
TargetP
chlo 3,  scret 3  (predict for XP_044325083.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123045906
tae-r.2
for
123189647
tae-r.2
for
123053775
hvu-r.1
for
123427127
bdi-r.1
for
100820966
osa-u.5
for
4329949
osa-u.5
for
4336287
zma-u.5
for
103627401
zma-u.5
for
100194092
sbi-r.1
for
8059667
sbi-r.1
for
8060205
ath-u.5
for
La1
ath-u.5
for
La2
gma-u.5
for
100803099
gma-u.5
for
100786016
sly-u.5
for
101259467
bra-r.6
for
103833293
bra-r.6
for
103830406
bra-r.6
for
103834519
vvi-u.5
for
104879005
vvi-u.5
for
100250699
ppo-u.5
for
7495710
ppo-u.5
for
7462941
mtr-u.5
for
25482256
ghi-r.1
for
107906952
ghi-r.1
for
107898436
ghi-r.1
for
107900508
bna-r.1
for
106436683
bna-r.1
for
106441077
bna-r.1
for
125576500
sot-r.1
for
102588675
cit-r.1
for
102610478
cit-r.1
for
102622153
nta-r.1
for
107783974
nta-r.1
for
107773773
cre-r.1
for
CHLRE_02g146200v5
cre-r.1
for
CHLRE_17g724200v5


Ortholog ID: 3832
Species tae tae tae hvu bdi osa osa zma zma sbi sbi ath ath gma gma sly bra bra bra vvi vvi ppo ppo mtr ghi ghi ghi bna bna bna sot cit cit nta nta cre cre
Symbol LOC123045906 LOC123189647 LOC123053775 LOC123427127 LOC100820966 LOC4329949 LOC4336287 LOC103627401 LOC100194092 LOC8059667 LOC8060205 La1 La2 LOC100803099 LOC100786016 LOC101259467 LOC103830406 LOC103834519 LOC103850538 LOC104879005 LOC100250699 LOC7495710 LOC7462941 LOC25482256 LOC107906952 LOC107898436 LOC107900508 LOC106436683 LOC125576500 LOC106361126 LOC102588675 LOC102610478 LOC102622153 LOC107783974 LOC107773773 CHLRE_02g146200v5 CHLRE_17g724200v5
Function* la protein 1 la protein 1 la protein 1 la protein 1-like la protein 1 la protein 1 la protein 1 la protein 1 uncharacterized LOC100194092 la protein 1 la protein 1 La protein 1 RNA recognition motif (RRM)-containing protein la protein 1 la protein 1 la protein 1 la protein 2 la protein 1 la protein 1 la protein 1 la protein 1 la protein 1 la protein 1 la protein 1 la protein 1 la protein 1-like la protein 1 la protein 1 la protein 1-like la protein 1-like la protein 1 la protein 1-like la protein 1 la protein 1 la protein 1 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 9
tae03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 2
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 2
zma00970 Aminoacyl-tRNA biosynthesis 2
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 5
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 5
bra03013 Nucleocytoplasmic transport 4
bra03010 Ribosome 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 6
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 4
cit04712 Circadian rhythm - plant 3
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
nta03013 Nucleocytoplasmic transport 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
nta03013 Nucleocytoplasmic transport 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123045906 123189647 123053775 123427127 100820966 4329949 4336287 103627401 100194092 8059667 8060205 829408 844327 100803099 100786016 101259467 103830406 103834519 103850538 104879005 100250699 7495710 7462941 25482256 107906952 107898436 107900508 106436683 125576500 106361126 102588675 102610478 102622153 107783974 107773773 5720519 5722749
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