ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
vvi-u.5	100257588	protein WHAT'S THIS FACTOR 9, mitochondrial
vvi-r.5	100257588	protein WHAT'S THIS FACTOR 9, mitochondrial
vvi-u.5	100268137	protein WHAT'S THIS FACTOR 9, mitochondrial
ath-u.5	AT4G24320	Ubiquitin carboxyl-terminal hydrolase family protein
ath-u.5	AT1G71850	Ubiquitin carboxyl-terminal hydrolase family protein
gma-u.5	100794231	protein WHAT'S THIS FACTOR 9, mitochondrial
gma-u.5	121173733	protein WHAT'S THIS FACTOR 9, mitochondrial
bra-r.6	103831698	protein WHAT'S THIS FACTOR 9, mitochondrial
bra-r.6	103861996	protein WHAT'S THIS FACTOR 9, mitochondrial
ppo-u.5	18098311	protein WHAT'S THIS FACTOR 9, mitochondrial
ppo-u.5	18104484	protein WHAT'S THIS FACTOR 1 homolog, chloroplastic
mtr-u.5	25496311	protein WHAT'S THIS FACTOR 9, mitochondrial
ghi-r.1	107921134	protein WHAT'S THIS FACTOR 9, mitochondrial
ghi-r.1	121204872	protein WHAT'S THIS FACTOR 9, mitochondrial
ghi-r.1	107925497	protein WHAT'S THIS FACTOR 9, mitochondrial
bna-r.1	106397653	protein WHAT'S THIS FACTOR 9, mitochondrial
cit-r.1	102612942	protein WHAT'S THIS FACTOR 9, mitochondrial
cit-r.1	102606933	protein WHAT'S THIS FACTOR 1, chloroplastic
sly-u.5	101258604	protein WHAT'S THIS FACTOR 9, mitochondrial
sly-u.5	101246929	protein WHAT'S THIS FACTOR 9, mitochondrial
sot-r.1	102594225	protein ROOT PRIMORDIUM DEFECTIVE 1
sot-r.1	102586642	protein ROOT PRIMORDIUM DEFECTIVE 1
nta-r.1	107802595	protein WHAT'S THIS FACTOR 9, mitochondrial-like
nta-r.1	107793079	protein WHAT'S THIS FACTOR 9, mitochondrial-like
nta-r.1	107764815	protein WHAT'S THIS FACTOR 9, mitochondrial
osa-u.5	4333568	protein WHAT'S THIS FACTOR 9, mitochondrial
zma-u.5	100273091	Ubiquitin carboxyl-terminal hydrolase family protein
tae-r.2	123113195	protein WHAT'S THIS FACTOR 9, mitochondrial
tae-r.2	123104905	protein WHAT'S THIS FACTOR 9, mitochondrial-like
tae-r.2	123122718	protein WHAT'S THIS FACTOR 9, mitochondrial-like
hvu-r.1	123398199	protein WHAT'S THIS FACTOR 9, mitochondrial-like
sbi-r.1	8057239	protein ROOT PRIMORDIUM DEFECTIVE 1
bdi-r.1	100845361	protein WHAT'S THIS FACTOR 1 homolog

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0003723 [list] [network] RNA binding

(1286 genes)

IEA

Protein

XP_010650578.1 [sequence] [blastp]
XP_059593132.1 [sequence] [blastp]

Subcellular
localization
wolf

mito 7, chlo 1, nucl 1	(predict for XP_010650578.1)
mito 7, chlo 1, nucl 1	(predict for XP_059593132.1)

Subcellular
localization
TargetP

mito 8	(predict for XP_010650578.1)
mito 8	(predict for XP_059593132.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100257588	vvi-r.5 for 100257588	vvi-u.5 for 100268137	ath-u.5 for AT4G24320	ath-u.5 for AT1G71850	gma-u.5 for 100794231	gma-u.5 for 121173733	bra-r.6 for 103831698	bra-r.6 for 103861996	ppo-u.5 for 18098311	ppo-u.5 for 18104484	mtr-u.5 for 25496311	ghi-r.1 for 107921134	ghi-r.1 for 121204872	ghi-r.1 for 107925497	bna-r.1 for 106397653	cit-r.1 for 102612942	cit-r.1 for 102606933	sly-u.5 for 101258604	sly-u.5 for 101246929	sot-r.1 for 102594225	sot-r.1 for 102586642	nta-r.1 for 107802595	nta-r.1 for 107793079	nta-r.1 for 107764815	osa-u.5 for 4333568	zma-u.5 for 100273091	tae-r.2 for 123113195	tae-r.2 for 123104905	tae-r.2 for 123122718	hvu-r.1 for 123398199	sbi-r.1 for 8057239	bdi-r.1 for 100845361