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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2  123122718  protein WHAT'S THIS FACTOR 9, mitochondrial-like 
 tae-r.2  123104905  protein WHAT'S THIS FACTOR 9, mitochondrial-like 
 tae-r.2  123113195  protein WHAT'S THIS FACTOR 9, mitochondrial 
 hvu-r.1  123398199  protein WHAT'S THIS FACTOR 9, mitochondrial-like 
 bdi-r.1  100845361  protein WHAT'S THIS FACTOR 1 homolog 
 osa-u.5  4333568  protein WHAT'S THIS FACTOR 9, mitochondrial 
 zma-u.5  100273091  Ubiquitin carboxyl-terminal hydrolase family protein 
 sbi-r.1  8057239  protein ROOT PRIMORDIUM DEFECTIVE 1 
 ath-u.5  AT4G24320  Ubiquitin carboxyl-terminal hydrolase family protein 
 ath-u.5  AT1G71850  Ubiquitin carboxyl-terminal hydrolase family protein 
 gma-u.5  100794231  protein WHAT'S THIS FACTOR 9, mitochondrial 
 sly-u.5  101258604  protein WHAT'S THIS FACTOR 9, mitochondrial 
 sly-u.5  101246929  protein WHAT'S THIS FACTOR 9, mitochondrial 
 bra-r.6  103831698  protein WHAT'S THIS FACTOR 9, mitochondrial 
 bra-r.6  103861996  protein WHAT'S THIS FACTOR 9, mitochondrial 
 vvi-u.5  100268137  protein WHAT'S THIS FACTOR 9, mitochondrial 
 vvi-u.5  100257588  protein WHAT'S THIS FACTOR 9, mitochondrial 
 ppo-u.5  18098311  protein WHAT'S THIS FACTOR 9, mitochondrial 
 ppo-u.5  18104484  protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 mtr-u.5  25496311  protein WHAT'S THIS FACTOR 9, mitochondrial 
 ghi-r.1  121204872  protein WHAT'S THIS FACTOR 9, mitochondrial 
 ghi-r.1  107926273  protein WHAT'S THIS FACTOR 9, mitochondrial 
 ghi-r.1  107925497  protein WHAT'S THIS FACTOR 9, mitochondrial 
 bna-r.1  106354178  protein WHAT'S THIS FACTOR 9, mitochondrial 
 sot-r.1  102594225  protein ROOT PRIMORDIUM DEFECTIVE 1 
 sot-r.1  102586642  protein ROOT PRIMORDIUM DEFECTIVE 1 
 cit-r.1  102606933  protein WHAT'S THIS FACTOR 1, chloroplastic 
 cit-r.1  102612942  protein WHAT'S THIS FACTOR 9, mitochondrial 
 nta-r.1  107802595  protein WHAT'S THIS FACTOR 9, mitochondrial-like 
 nta-r.1  107793079  protein WHAT'S THIS FACTOR 9, mitochondrial-like 
 nta-r.1  107775625  protein WHAT'S THIS FACTOR 9, mitochondrial-like 

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Top 50 coexpressed genes to 123122718 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123122718 (tae-r.2 coexpression data)

CoexMap"123122718"


taeLOC123122718 | Entrez gene ID : 123122718
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 1 1 1 2 1 2 2 2 2 1 3 1 2 2 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (4004 genes)  IEA  
Protein XP_044398981.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 5,  chlo 4  (predict for XP_044398981.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_044398981.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

tae-r.2
for
123122718


tae-r.2
for
123104905


tae-r.2
for
123113195


hvu-r.1
for
123398199


bdi-r.1
for
100845361


osa-u.5
for
4333568


zma-u.5
for
100273091


sbi-r.1
for
8057239


ath-u.5
for
AT4G24320


ath-u.5
for
AT1G71850


gma-u.5
for
100794231


sly-u.5
for
101258604


sly-u.5
for
101246929


bra-r.6
for
103831698


bra-r.6
for
103861996


vvi-u.5
for
100268137


vvi-u.5
for
100257588


ppo-u.5
for
18098311


ppo-u.5
for
18104484


mtr-u.5
for
25496311


ghi-r.1
for
121204872


ghi-r.1
for
107926273


ghi-r.1
for
107925497


bna-r.1
for
106354178


sot-r.1
for
102594225


sot-r.1
for
102586642


cit-r.1
for
102606933


cit-r.1
for
102612942


nta-r.1
for
107802595


nta-r.1
for
107793079


nta-r.1
for
107775625



Ortholog ID: 4954
Species tae tae tae hvu bdi osa zma sbi ath ath gma sly sly bra bra vvi vvi ppo ppo mtr ghi ghi ghi bna sot sot cit cit nta nta nta
Symbol LOC123122718 LOC123104905 LOC123113195 LOC123398199 LOC100845361 LOC4333568 LOC100273091 LOC8057239 AT4G24320 AT1G71850 LOC100794231 LOC101258604 LOC101246929 LOC103831698 LOC103861996 LOC100268137 LOC100257588 LOC18098311 LOC18104484 LOC25496311 LOC121204872 LOC107926273 LOC107921134 LOC106354178 LOC102594225 LOC102586642 LOC102606933 LOC102612942 LOC107793079 LOC107775625 LOC107764815
Function* protein WHAT'S THIS FACTOR 9, mitochondrial-like protein WHAT'S THIS FACTOR 9, mitochondrial-like protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial-like protein WHAT'S THIS FACTOR 1 homolog protein WHAT'S THIS FACTOR 9, mitochondrial Ubiquitin carboxyl-terminal hydrolase family protein protein ROOT PRIMORDIUM DEFECTIVE 1 Ubiquitin carboxyl-terminal hydrolase family protein Ubiquitin carboxyl-terminal hydrolase family protein protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein WHAT'S THIS FACTOR 1, chloroplastic protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial-like protein WHAT'S THIS FACTOR 9, mitochondrial-like protein WHAT'S THIS FACTOR 9, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123122718 123104905 123113195 123398199 100845361 4333568 100273091 8057239 828535 843515 100794231 101258604 101246929 103831698 103861996 100268137 100257588 18098311 18104484 25496311 121204872 107926273 107921134 106354178 102594225 102586642 102606933 102612942 107793079 107775625 107764815
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