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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25496311   protein WHAT'S THIS FACTOR 9, mitochondrial 
 mtr-r.5   25496311   protein WHAT'S THIS FACTOR 9, mitochondrial 
 gma-u.5   100794231   protein WHAT'S THIS FACTOR 9, mitochondrial 
 gma-u.5   121173733   protein WHAT'S THIS FACTOR 9, mitochondrial 
 ppo-u.5   18098311   protein WHAT'S THIS FACTOR 9, mitochondrial 
 ppo-u.5   18104484   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 ath-u.5   AT4G24320   Ubiquitin carboxyl-terminal hydrolase family protein 
 ath-u.5   AT1G71850   Ubiquitin carboxyl-terminal hydrolase family protein 
 vvi-u.5   100257588   protein WHAT'S THIS FACTOR 9, mitochondrial 
 vvi-u.5   100268137   protein WHAT'S THIS FACTOR 9, mitochondrial 
 sly-u.5   101258604   protein WHAT'S THIS FACTOR 9, mitochondrial 
 sly-u.5   101246929   protein WHAT'S THIS FACTOR 9, mitochondrial 
 osa-u.5   4333568   protein WHAT'S THIS FACTOR 9, mitochondrial 
 zma-u.5   100273091   Ubiquitin carboxyl-terminal hydrolase family protein 

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Top 50 coexpressed genes to 25496311 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25496311 (mtr-u.5 coexpression data)

CoexMap"25496311"


mtrLOC25496311 | Entrez gene ID : 25496311      
Species mtr gma ppo ath vvi sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 2 2 2 2 2 2 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1400 genes)  IEA  
Protein XP_013452046.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 4,  mito 1  (predict for XP_013452046.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_013452046.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25496311

.
mtr-r.5
for
25496311

.
gma-u.5
for
100794231

.
gma-u.5
for
121173733

.
ppo-u.5
for
18098311

.
ppo-u.5
for
18104484

.
ath-u.5
for
AT4G24320

.
ath-u.5
for
AT1G71850

.
vvi-u.5
for
100257588

.
vvi-u.5
for
100268137

.
sly-u.5
for
101258604

.
sly-u.5
for
101246929

.
osa-u.5
for
4333568

.
zma-u.5
for
100273091

.


Ortholog ID: 4954
Species ath ath sly sly osa zma bra bra vvi vvi ppo ppo mtr tae tae hvu ghi ghi bna sbi sot sot cit cit bdi nta nta
Symbol AT4G24320 AT1G71850 LOC101258604 LOC101246929 LOC4333568 LOC100273091 LOC103831698 LOC103861996 LOC100257588 LOC100268137 LOC18098311 LOC18104484 LOC25496311 LOC123122718 LOC123104905 LOC123398199 LOC107926273 LOC121204872 LOC106354178 LOC8057239 LOC102586642 LOC102594225 LOC102606933 LOC102612942 LOC100845361 LOC107764815 LOC107775625
Function* Ubiquitin carboxyl-terminal hydrolase family protein Ubiquitin carboxyl-terminal hydrolase family protein protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial Ubiquitin carboxyl-terminal hydrolase family protein protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial-like protein WHAT'S THIS FACTOR 9, mitochondrial-like protein WHAT'S THIS FACTOR 9, mitochondrial-like protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein WHAT'S THIS FACTOR 1, chloroplastic protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 1 homolog protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828535 843515 101258604 101246929 4333568 100273091 103831698 103861996 100257588 100268137 18098311 18104484 25496311 123122718 123104905 123398199 107926273 121204872 106354178 8057239 102586642 102594225 102606933 102612942 100845361 107764815 107775625
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