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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1  102606933  protein WHAT'S THIS FACTOR 1, chloroplastic 
 cit-r.1  102612942  protein WHAT'S THIS FACTOR 9, mitochondrial 
 ath-u.5  AT4G24320  Ubiquitin carboxyl-terminal hydrolase family protein 
 ath-u.5  AT1G71850  Ubiquitin carboxyl-terminal hydrolase family protein 
 bra-r.6  103831698  protein WHAT'S THIS FACTOR 9, mitochondrial 
 bra-r.6  103861996  protein WHAT'S THIS FACTOR 9, mitochondrial 
 ghi-r.1  107925497  protein WHAT'S THIS FACTOR 9, mitochondrial 
 ghi-r.1  107921134  protein WHAT'S THIS FACTOR 9, mitochondrial 
 ghi-r.1  121204872  protein WHAT'S THIS FACTOR 9, mitochondrial 
 bna-r.1  106397653  protein WHAT'S THIS FACTOR 9, mitochondrial 
 gma-u.5  100794231  protein WHAT'S THIS FACTOR 9, mitochondrial 
 vvi-u.5  100268137  protein WHAT'S THIS FACTOR 9, mitochondrial 
 vvi-u.5  100257588  protein WHAT'S THIS FACTOR 9, mitochondrial 
 ppo-u.5  18104484  protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 ppo-u.5  18098311  protein WHAT'S THIS FACTOR 9, mitochondrial 
 mtr-u.5  25496311  protein WHAT'S THIS FACTOR 9, mitochondrial 
 sly-u.5  101258604  protein WHAT'S THIS FACTOR 9, mitochondrial 
 sly-u.5  101246929  protein WHAT'S THIS FACTOR 9, mitochondrial 
 sot-r.1  102594225  protein ROOT PRIMORDIUM DEFECTIVE 1 
 sot-r.1  102586642  protein ROOT PRIMORDIUM DEFECTIVE 1 
 nta-r.1  107802595  protein WHAT'S THIS FACTOR 9, mitochondrial-like 
 nta-r.1  107793079  protein WHAT'S THIS FACTOR 9, mitochondrial-like 
 nta-r.1  107764815  protein WHAT'S THIS FACTOR 9, mitochondrial 
 osa-u.5  4333568  protein WHAT'S THIS FACTOR 9, mitochondrial 
 zma-u.5  100273091  Ubiquitin carboxyl-terminal hydrolase family protein 
 tae-r.2  123122718  protein WHAT'S THIS FACTOR 9, mitochondrial-like 
 tae-r.2  123104905  protein WHAT'S THIS FACTOR 9, mitochondrial-like 
 tae-r.2  123113195  protein WHAT'S THIS FACTOR 9, mitochondrial 
 hvu-r.1  123398199  protein WHAT'S THIS FACTOR 9, mitochondrial-like 
 sbi-r.1  8057239  protein ROOT PRIMORDIUM DEFECTIVE 1 
 bdi-r.1  100845361  protein WHAT'S THIS FACTOR 1 homolog 

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Top 50 coexpressed genes to 102606933 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102606933 (cit-r.1 coexpression data)

CoexMap"102606933"


citLOC102606933 | Entrez gene ID : 102606933
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 2 2 3 1 1 2 2 1 2 2 3 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1117 genes)  IEA  
Protein XP_006473221.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 3,  cyto_nucl 3  (predict for XP_006473221.2)
Subcellular
localization
TargetP
other 6  (predict for XP_006473221.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

cit-r.1
for
102606933


cit-r.1
for
102612942


ath-u.5
for
AT4G24320


ath-u.5
for
AT1G71850


bra-r.6
for
103831698


bra-r.6
for
103861996


ghi-r.1
for
107925497


ghi-r.1
for
107921134


ghi-r.1
for
121204872


bna-r.1
for
106397653


gma-u.5
for
100794231


vvi-u.5
for
100268137


vvi-u.5
for
100257588


ppo-u.5
for
18104484


ppo-u.5
for
18098311


mtr-u.5
for
25496311


sly-u.5
for
101258604


sly-u.5
for
101246929


sot-r.1
for
102594225


sot-r.1
for
102586642


nta-r.1
for
107802595


nta-r.1
for
107793079


nta-r.1
for
107764815


osa-u.5
for
4333568


zma-u.5
for
100273091


tae-r.2
for
123122718


tae-r.2
for
123104905


tae-r.2
for
123113195


hvu-r.1
for
123398199


sbi-r.1
for
8057239


bdi-r.1
for
100845361



Ortholog ID: 4954
Species cit cit ath ath bra bra ghi ghi ghi bna gma vvi vvi ppo ppo mtr sly sly sot sot nta nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC102606933 LOC102612942 AT4G24320 AT1G71850 LOC103831698 LOC103861996 LOC107921134 LOC121204872 LOC107926273 LOC106354178 LOC100794231 LOC100268137 LOC100257588 LOC18104484 LOC18098311 LOC25496311 LOC101258604 LOC101246929 LOC102594225 LOC102586642 LOC107793079 LOC107764815 LOC107775625 LOC4333568 LOC100273091 LOC123122718 LOC123104905 LOC123113195 LOC123398199 LOC8057239 LOC100845361
Function* protein WHAT'S THIS FACTOR 1, chloroplastic protein WHAT'S THIS FACTOR 9, mitochondrial Ubiquitin carboxyl-terminal hydrolase family protein Ubiquitin carboxyl-terminal hydrolase family protein protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein WHAT'S THIS FACTOR 9, mitochondrial-like protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial-like protein WHAT'S THIS FACTOR 9, mitochondrial Ubiquitin carboxyl-terminal hydrolase family protein protein WHAT'S THIS FACTOR 9, mitochondrial-like protein WHAT'S THIS FACTOR 9, mitochondrial-like protein WHAT'S THIS FACTOR 9, mitochondrial protein WHAT'S THIS FACTOR 9, mitochondrial-like protein ROOT PRIMORDIUM DEFECTIVE 1 protein WHAT'S THIS FACTOR 1 homolog
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102606933 102612942 828535 843515 103831698 103861996 107921134 121204872 107926273 106354178 100794231 100268137 100257588 18104484 18098311 25496311 101258604 101246929 102594225 102586642 107793079 107764815 107775625 4333568 100273091 123122718 123104905 123113195 123398199 8057239 100845361
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