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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100263920   pentatricopeptide repeat-containing protein At3g09060 
 vvi-r.5   100263920   pentatricopeptide repeat-containing protein At3g09060 
 ath-u.5   AT3G09060   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100819721   pentatricopeptide repeat-containing protein At3g09060 
 bra-r.6   103859312   pentatricopeptide repeat-containing protein At3g09060 
 ppo-u.5   7487453   pentatricopeptide repeat-containing protein At3g09060 
 mtr-u.5   25498726   pentatricopeptide repeat-containing protein At3g09060 
 ghi-r.1   107958038   pentatricopeptide repeat-containing protein At3g09060 
 ghi-r.1   107905641   pentatricopeptide repeat-containing protein At3g09060 
 sly-u.5   101243633   pentatricopeptide repeat-containing protein 
 sot-r.1   102578283   pentatricopeptide repeat-containing protein At3g09060 
 nta-r.1   107779460   uncharacterized LOC107779460 
 nta-r.1   107768529   uncharacterized LOC107768529 
 osa-u.5   4324816   pentatricopeptide repeat-containing protein At3g09060 
 tae-r.2   123079781   pentatricopeptide repeat-containing protein At3g09060 
 tae-r.2   123071445   pentatricopeptide repeat-containing protein At3g09060 
 tae-r.2   123062625   pentatricopeptide repeat-containing protein At3g09060 
 hvu-r.1   123444869   pentatricopeptide repeat-containing protein At3g09060 
 sbi-r.1   8058922   pentatricopeptide repeat-containing protein At3g09060 
 bdi-r.1   100830916   pentatricopeptide repeat-containing protein At3g09060 

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Top 50 coexpressed genes to 100263920 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100263920 (vvi-u.5 coexpression data)

CoexMap"100263920"


vviLOC100263920 | Entrez gene ID : 100263920      
Species vvi ath gma bra ppo mtr ghi sly sot nta osa tae hvu sbi bdi zma cre bna cit
Paralog 2 1 1 1 1 1 2 1 1 2 1 3 1 1 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_010650860.1 [sequence] [blastp]
XP_010650863.1 [sequence] [blastp]
XP_010650864.1 [sequence] [blastp]
XP_010650868.1 [sequence] [blastp]
XP_019076349.1 [sequence] [blastp]
XP_019076350.1 [sequence] [blastp]
XP_019076352.1 [sequence] [blastp]
XP_019076353.1 [sequence] [blastp]
XP_019076354.1 [sequence] [blastp]
XP_059593501.1 [sequence] [blastp]
XP_059593502.1 [sequence] [blastp]
XP_059593503.1 [sequence] [blastp]
XP_059593504.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 3,  mito 3  (predict for XP_010650860.1)
chlo 4,  nucl 3,  mito 3  (predict for XP_010650863.1)
chlo 4,  nucl 3,  mito 3  (predict for XP_010650864.1)
chlo 4,  nucl 3,  mito 3  (predict for XP_010650868.1)
chlo 4,  nucl 3,  mito 3  (predict for XP_019076349.1)
chlo 4,  nucl 3,  mito 3  (predict for XP_019076350.1)
chlo 4,  nucl 3,  mito 3  (predict for XP_019076352.1)
chlo 4,  nucl 3,  mito 3  (predict for XP_019076353.1)
chlo 4,  nucl 3,  mito 3  (predict for XP_019076354.1)
chlo 4,  nucl 3,  mito 3  (predict for XP_059593501.1)
chlo 4,  nucl 3,  mito 3  (predict for XP_059593502.1)
chlo 4,  nucl 3,  mito 3  (predict for XP_059593503.1)
chlo 4,  nucl 3,  mito 3  (predict for XP_059593504.1)
Subcellular
localization
TargetP
chlo 3  (predict for XP_010650860.1)
chlo 3  (predict for XP_010650863.1)
chlo 3  (predict for XP_010650864.1)
chlo 3  (predict for XP_010650868.1)
chlo 3  (predict for XP_019076349.1)
chlo 3  (predict for XP_019076350.1)
chlo 3  (predict for XP_019076352.1)
chlo 3  (predict for XP_019076353.1)
chlo 3  (predict for XP_019076354.1)
chlo 3  (predict for XP_059593501.1)
chlo 3  (predict for XP_059593502.1)
chlo 3  (predict for XP_059593503.1)
chlo 3  (predict for XP_059593504.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100263920
vvi-r.5
for
100263920
ath-u.5
for
AT3G09060
gma-u.5
for
100819721
bra-r.6
for
103859312
ppo-u.5
for
7487453
mtr-u.5
for
25498726
ghi-r.1
for
107958038
ghi-r.1
for
107905641
sly-u.5
for
101243633
sot-r.1
for
102578283
nta-r.1
for
107779460
nta-r.1
for
107768529
osa-u.5
for
4324816
tae-r.2
for
123079781
tae-r.2
for
123071445
tae-r.2
for
123062625
hvu-r.1
for
123444869
sbi-r.1
for
8058922
bdi-r.1
for
100830916


Ortholog ID: 11672
Species vvi ath gma bra ppo mtr ghi ghi sly sot nta nta osa tae tae tae hvu sbi bdi
Symbol LOC100263920 AT3G09060 LOC100819721 LOC103859312 LOC7487453 LOC25498726 LOC107958038 LOC107905641 LOC101243633 LOC102578283 LOC107779460 LOC107768529 LOC4324816 LOC123079781 LOC123071445 LOC123062625 LOC123444869 LOC8058922 LOC100830916
Function* pentatricopeptide repeat-containing protein At3g09060 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At3g09060 uncharacterized LOC107779460 uncharacterized LOC107768529 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae03020 RNA polymerase 3
tae00970 Aminoacyl-tRNA biosynthesis 3
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 5
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100263920 820059 100819721 103859312 7487453 25498726 107958038 107905641 101243633 102578283 107779460 107768529 4324816 123079781 123071445 123062625 123444869 8058922 100830916
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