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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123062625   pentatricopeptide repeat-containing protein At3g09060 
 tae-r.2   123079781   pentatricopeptide repeat-containing protein At3g09060 
 tae-r.2   123071445   pentatricopeptide repeat-containing protein At3g09060 
 hvu-r.1   123444869   pentatricopeptide repeat-containing protein At3g09060 
 bdi-r.1   100830916   pentatricopeptide repeat-containing protein At3g09060 
 osa-u.5   4324816   pentatricopeptide repeat-containing protein At3g09060 
 sbi-r.1   8058922   pentatricopeptide repeat-containing protein At3g09060 
 ath-u.5   AT3G09060   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100819721   pentatricopeptide repeat-containing protein At3g09060 
 sly-u.5   101243633   pentatricopeptide repeat-containing protein 
 bra-r.6   103859312   pentatricopeptide repeat-containing protein At3g09060 
 vvi-u.5   100263920   pentatricopeptide repeat-containing protein At3g09060 
 ppo-u.5   7487453   pentatricopeptide repeat-containing protein At3g09060 
 mtr-u.5   25498726   pentatricopeptide repeat-containing protein At3g09060 
 ghi-r.1   107905641   pentatricopeptide repeat-containing protein At3g09060 
 ghi-r.1   107958038   pentatricopeptide repeat-containing protein At3g09060 
 sot-r.1   102578283   pentatricopeptide repeat-containing protein At3g09060 
 nta-r.1   107768529   uncharacterized LOC107768529 
 nta-r.1   107779460   uncharacterized LOC107779460 

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Top 50 coexpressed genes to 123062625 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123062625 (tae-r.2 coexpression data)

CoexMap"123062625"


taeLOC123062625 | Entrez gene ID : 123062625    
Species tae hvu bdi osa sbi ath gma sly bra vvi ppo mtr ghi sot nta cre zma cit bna
Paralog 3 1 1 1 1 1 1 1 1 1 1 1 2 1 2 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (862 genes)  IEA  
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044342149.1 [sequence] [blastp]
XP_044342150.1 [sequence] [blastp]
XP_044342151.1 [sequence] [blastp]
XP_044342153.1 [sequence] [blastp]
XP_044342154.1 [sequence] [blastp]
XP_044342155.1 [sequence] [blastp]
XP_044342156.1 [sequence] [blastp]
XP_044342157.1 [sequence] [blastp]
XP_044342158.1 [sequence] [blastp]
XP_044342159.1 [sequence] [blastp]
XP_044342160.1 [sequence] [blastp]
XP_044342161.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 3  (predict for XP_044342149.1)
chlo 7,  mito 3  (predict for XP_044342150.1)
chlo 7,  mito 3  (predict for XP_044342151.1)
chlo 7,  mito 3  (predict for XP_044342153.1)
chlo 7,  mito 3  (predict for XP_044342154.1)
chlo 7,  mito 3  (predict for XP_044342155.1)
chlo 7,  mito 3  (predict for XP_044342156.1)
chlo 7,  mito 3  (predict for XP_044342157.1)
chlo 7,  mito 3  (predict for XP_044342158.1)
chlo 7,  mito 3  (predict for XP_044342159.1)
chlo 7,  mito 3  (predict for XP_044342160.1)
chlo 7,  mito 3  (predict for XP_044342161.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_044342149.1)
chlo 7  (predict for XP_044342150.1)
chlo 7  (predict for XP_044342151.1)
chlo 7  (predict for XP_044342153.1)
chlo 7  (predict for XP_044342154.1)
chlo 7  (predict for XP_044342155.1)
chlo 7  (predict for XP_044342156.1)
chlo 7  (predict for XP_044342157.1)
chlo 7  (predict for XP_044342158.1)
chlo 7  (predict for XP_044342159.1)
chlo 7  (predict for XP_044342160.1)
chlo 7  (predict for XP_044342161.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123062625
tae-r.2
for
123079781
tae-r.2
for
123071445
hvu-r.1
for
123444869
bdi-r.1
for
100830916
osa-u.5
for
4324816
sbi-r.1
for
8058922
ath-u.5
for
AT3G09060
gma-u.5
for
100819721
sly-u.5
for
101243633
bra-r.6
for
103859312
vvi-u.5
for
100263920
ppo-u.5
for
7487453
mtr-u.5
for
25498726
ghi-r.1
for
107905641
ghi-r.1
for
107958038
sot-r.1
for
102578283
nta-r.1
for
107768529
nta-r.1
for
107779460


Ortholog ID: 11672
Species tae tae tae hvu bdi osa sbi ath gma sly bra vvi ppo mtr ghi ghi sot nta nta
Symbol LOC123062625 LOC123079781 LOC123071445 LOC123444869 LOC100830916 LOC4324816 LOC8058922 AT3G09060 LOC100819721 LOC101243633 LOC103859312 LOC100263920 LOC7487453 LOC25498726 LOC107905641 LOC107958038 LOC102578283 LOC107768529 LOC107779460
Function* pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 uncharacterized LOC107768529 uncharacterized LOC107779460
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae03020 RNA polymerase 3
tae00970 Aminoacyl-tRNA biosynthesis 3
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 5
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123062625 123079781 123071445 123444869 100830916 4324816 8058922 820059 100819721 101243633 103859312 100263920 7487453 25498726 107905641 107958038 102578283 107768529 107779460
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