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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7487453   pentatricopeptide repeat-containing protein At3g09060 
 ppo-r.4   7487453   pentatricopeptide repeat-containing protein At3g09060 
 ppo-m.4   7487453   pentatricopeptide repeat-containing protein At3g09060 
 gma-u.5   100819721   pentatricopeptide repeat-containing protein At3g09060 
 mtr-u.5   25498726   pentatricopeptide repeat-containing protein At3g09060 
 ath-u.5   AT3G09060   Pentatricopeptide repeat (PPR) superfamily protein 
 vvi-u.5   100263920   pentatricopeptide repeat-containing protein At3g09060 
 sly-u.5   101243633   pentatricopeptide repeat-containing protein 
 osa-u.5   4324816   pentatricopeptide repeat-containing protein At3g09060 

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Top 50 coexpressed genes to 7487453 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7487453 (ppo-u.5 coexpression data)

CoexMap"7487453"


ppoLOC7487453 | Entrez gene ID : 7487453    
Species ppo gma mtr ath vvi sly osa sbi nta bra cre hvu cit bdi sot zma tae bna ghi
Paralog 3 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002322960.4 [sequence] [blastp]
XP_024443678.2 [sequence] [blastp]
XP_024443679.2 [sequence] [blastp]
XP_024443680.2 [sequence] [blastp]
XP_024443681.2 [sequence] [blastp]
XP_024443682.2 [sequence] [blastp]
XP_024443683.2 [sequence] [blastp]
XP_024443684.2 [sequence] [blastp]
XP_024443685.2 [sequence] [blastp]
XP_024443686.2 [sequence] [blastp]
XP_024443688.2 [sequence] [blastp]
XP_024443690.2 [sequence] [blastp]
XP_024443691.2 [sequence] [blastp]
XP_024443692.2 [sequence] [blastp]
XP_024443693.2 [sequence] [blastp]
XP_024443696.2 [sequence] [blastp]
XP_024443697.2 [sequence] [blastp]
XP_024443698.2 [sequence] [blastp]
XP_024443699.2 [sequence] [blastp]
XP_024443700.2 [sequence] [blastp]
XP_024443701.2 [sequence] [blastp]
XP_024443702.2 [sequence] [blastp]
XP_024443706.2 [sequence] [blastp]
XP_052303976.1 [sequence] [blastp]
XP_052303977.1 [sequence] [blastp]
XP_052303979.1 [sequence] [blastp]
XP_052303980.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_002322960.4)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_024443678.2)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_024443679.2)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_024443680.2)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_024443681.2)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_024443682.2)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_024443683.2)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_024443684.2)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_024443685.2)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_024443686.2)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_024443688.2)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_024443690.2)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_024443691.2)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_024443692.2)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_024443693.2)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_024443696.2)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_024443697.2)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_024443698.2)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_024443699.2)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_024443700.2)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_024443701.2)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_024443702.2)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_024443706.2)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_052303976.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_052303977.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_052303979.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_052303980.1)
Subcellular
localization
TargetP
mito 2  (predict for XP_002322960.4)
mito 2  (predict for XP_024443678.2)
mito 2  (predict for XP_024443679.2)
mito 2  (predict for XP_024443680.2)
mito 2  (predict for XP_024443681.2)
mito 2  (predict for XP_024443682.2)
mito 2  (predict for XP_024443683.2)
mito 2  (predict for XP_024443684.2)
mito 2  (predict for XP_024443685.2)
mito 2  (predict for XP_024443686.2)
mito 2  (predict for XP_024443688.2)
mito 2  (predict for XP_024443690.2)
mito 2  (predict for XP_024443691.2)
mito 2  (predict for XP_024443692.2)
mito 2  (predict for XP_024443693.2)
mito 2  (predict for XP_024443696.2)
mito 2  (predict for XP_024443697.2)
mito 2  (predict for XP_024443698.2)
mito 2  (predict for XP_024443699.2)
mito 2  (predict for XP_024443700.2)
mito 2  (predict for XP_024443701.2)
mito 2  (predict for XP_024443702.2)
mito 2  (predict for XP_024443706.2)
mito 2  (predict for XP_052303976.1)
mito 2  (predict for XP_052303977.1)
mito 2  (predict for XP_052303979.1)
mito 2  (predict for XP_052303980.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7487453

.
ppo-r.4
for
7487453

.
ppo-m.4
for
7487453

.
gma-u.5
for
100819721

.
mtr-u.5
for
25498726

.
ath-u.5
for
AT3G09060

.
vvi-u.5
for
100263920

.
sly-u.5
for
101243633

.
osa-u.5
for
4324816

.


Ortholog ID: 11672
Species ath gma sly osa bra vvi ppo mtr tae tae hvu ghi ghi sbi sot bdi nta nta
Symbol AT3G09060 LOC100819721 LOC101243633 LOC4324816 LOC103859312 LOC100263920 LOC7487453 LOC25498726 LOC123062625 LOC123079781 LOC123444869 LOC107958038 LOC107905641 LOC8058922 LOC102578283 LOC100830916 LOC107779460 LOC107768529
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 uncharacterized LOC107779460 uncharacterized LOC107768529
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae03020 RNA polymerase 3
tae00970 Aminoacyl-tRNA biosynthesis 3
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820059 100819721 101243633 4324816 103859312 100263920 7487453 25498726 123062625 123079781 123444869 107958038 107905641 8058922 102578283 100830916 107779460 107768529
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