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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123079781   pentatricopeptide repeat-containing protein At3g09060 
 osa-u.5   4324816   pentatricopeptide repeat-containing protein At3g09060 
 ath-u.5   AT3G09060   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100819721   pentatricopeptide repeat-containing protein At3g09060 
 sly-u.5   101243633   pentatricopeptide repeat-containing protein 
 vvi-u.5   100263920   pentatricopeptide repeat-containing protein At3g09060 
 ppo-u.5   7487453   pentatricopeptide repeat-containing protein At3g09060 
 mtr-u.5   25498726   pentatricopeptide repeat-containing protein At3g09060 

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Top 50 coexpressed genes to 123079781 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123079781 (tae-r.2 coexpression data)

CoexMap"123079781"


taeLOC123079781 | Entrez gene ID : 123079781    
Species tae osa ath gma sly vvi ppo mtr bdi hvu bra cit bna sbi ghi sot nta cre zma
Paralog 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (862 genes)  IEA  
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044358520.1 [sequence] [blastp]
XP_044358521.1 [sequence] [blastp]
XP_044358522.1 [sequence] [blastp]
XP_044358523.1 [sequence] [blastp]
XP_044358524.1 [sequence] [blastp]
XP_044358525.1 [sequence] [blastp]
XP_044358526.1 [sequence] [blastp]
XP_044358527.1 [sequence] [blastp]
XP_044358528.1 [sequence] [blastp]
XP_044358529.1 [sequence] [blastp]
XP_044358530.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 1,  nucl 1  (predict for XP_044358520.1)
cyto 6,  chlo 1,  nucl 1  (predict for XP_044358521.1)
cyto 6,  chlo 1,  nucl 1  (predict for XP_044358522.1)
cyto 6,  chlo 1,  nucl 1  (predict for XP_044358523.1)
cyto 6,  chlo 1,  nucl 1  (predict for XP_044358524.1)
cyto 6,  chlo 1,  nucl 1  (predict for XP_044358525.1)
cyto 6,  chlo 1,  nucl 1  (predict for XP_044358526.1)
cyto 6,  chlo 1,  nucl 1  (predict for XP_044358527.1)
cyto 6,  chlo 1,  nucl 1  (predict for XP_044358528.1)
cyto 6,  chlo 1,  nucl 1  (predict for XP_044358529.1)
cyto 6,  chlo 1,  nucl 1  (predict for XP_044358530.1)
Subcellular
localization
TargetP
other 8  (predict for XP_044358520.1)
other 8  (predict for XP_044358521.1)
other 8  (predict for XP_044358522.1)
other 8  (predict for XP_044358523.1)
other 8  (predict for XP_044358524.1)
other 8  (predict for XP_044358525.1)
other 8  (predict for XP_044358526.1)
other 8  (predict for XP_044358527.1)
other 8  (predict for XP_044358528.1)
other 8  (predict for XP_044358529.1)
other 8  (predict for XP_044358530.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123079781
osa-u.5
for
4324816
ath-u.5
for
AT3G09060
gma-u.5
for
100819721
sly-u.5
for
101243633
vvi-u.5
for
100263920
ppo-u.5
for
7487453
mtr-u.5
for
25498726


Ortholog ID: 11672
Species tae tae hvu bdi osa sbi ath gma sly bra vvi ppo mtr ghi ghi sot nta nta
Symbol LOC123062625 LOC123079781 LOC123444869 LOC100830916 LOC4324816 LOC8058922 AT3G09060 LOC100819721 LOC101243633 LOC103859312 LOC100263920 LOC7487453 LOC25498726 LOC107958038 LOC107905641 LOC102578283 LOC107779460 LOC107768529
Function* pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 pentatricopeptide repeat-containing protein At3g09060 uncharacterized LOC107779460 uncharacterized LOC107768529
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae03020 RNA polymerase 3
tae00970 Aminoacyl-tRNA biosynthesis 3
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123062625 123079781 123444869 100830916 4324816 8058922 820059 100819721 101243633 103859312 100263920 7487453 25498726 107958038 107905641 102578283 107779460 107768529
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